[Psidev-ms-dev] New version 3.75.0 of psi-ms.obo

[mayerg97 <ger...@ru...>]

Dear proteomics community,

attached you find the new version 3.75.0 of the psi-ms.obo file.


Changed CV terms in version 3.75.0 of psi-ms.obo:
=================================================
************ Changed is_a from 'p-value for peptides'
************ --> 'distinct peptide-level p-value'
[Term]
id: MS:1001396
name: Phenyx:PepPvalue
def: "The p-value of a peptide sequence match in Phenyx." [PSI:PI]
xref: value-type:xsd\:double "The allowed value-type for this CV term."
is_a: MS:1001143 ! search engine specific score for PSMs
is_a: MS:1001153 ! search engine specific score
is_a: MS:1001870 ! distinct peptide-level p-value

************ Added is_a: MS:1002358 !
************ search engine specific score for distinct peptides
[Term]
id: MS:1002468
name: PeptideShaker peptide score
def: "The probability based PeptideShaker peptide score." [PSI:PI]
is_a: MS:1001153 ! search engine specific score
is_a: MS:1002358 ! search engine specific score for distinct peptides
relationship: has_order MS:1002108 ! higher score better

************ Added is_a: MS:1002368 !
************ search engine specific score for protein groups
[Term]
id: MS:1002470
name: PeptideShaker protein group score
def: "The probability based PeptideShaker protein group score." [PSI:PI]
is_a: MS:1001153 ! search engine specific score
is_a: MS:1002368 ! search engine specific score for protein groups
relationship: has_order MS:1002108 ! higher score better

Best Regards,
Gerhard

-- 
---
Dipl. Inform. med., Dipl. Wirtsch. Inf. Gerhard Mayer
Bioinformatics / Biostatistics
Medizinisches-Proteom-Center (MPC)
Ruhr-Universität Bochum
Zentrum für klinische Forschung I (ZKF I), E.049a
Universitätsstraße 150
D-44801 Bochum
  
Phone:	+49(0)234/32-21006
Fax:	+49(0)234/32-14554
Email:	ger...@ru...
Web:	http://www.medizinisches-proteom-center.de