Re: [Psidev-ms-dev] mzML validation

[Jones, A. <And...@li...>]

Thanks all - can anyone make a build of the Java tool - the source is only present from the link, seems a bit unreasonable to get users to compile it :-)

-----Original Message-----
From: 'Eric Deutsch' [mailto:Eri...@sy...] 
Sent: 01 May 2013 19:11
To: Mass spectrometry standard development
Cc: Eric Deutsch
Subject: Re: [Psidev-ms-dev] mzML validation

Hi everyone, there is also a Java version available in SourceForge:

https://psidev.svn.sourceforge.net/svnroot/psidev/psi/mzml/validator/

regards,
Eric


> -----Original Message-----
> From: Steffen Neumann [mailto:sne...@ip...]
> Sent: Wednesday, May 01, 2013 9:49 AM
> To: Mass spectrometry standard development
> Subject: Re: [Psidev-ms-dev] mzML validation
>
> Hi,
>
> On Wed, 2013-05-01 at 15:28 +0000, Jones, Andy wrote:
> ...
> >  is purely an online validator so will presumably only work for 
> > small files. I thought there was a downloadable Java app for doing 
> > mzML validation, but I can’t see any obvious link to it,
>
> Almost ;-) It's C++.
>
> The "mzML semantic validator created by Marc Sturm (OpenMS/TOPP)"
> is based on the FileInfo Tool,
> www-bs2.informatik.uni-tuebingen.de/services/OpenMS-
> release/html/TOPP_FileInfo.html
>
> So download OpenMS and use it's FileInfo.
>
> Yours,
> Steffen
>
>
>
> --
> IPB Halle                    AG Massenspektrometrie & Bioinformatik
> Dr. Steffen Neumann          http://www.IPB-Halle.DE
> Weinberg 3                   http://msbi.bic-gh.de
> 06120 Halle                  Tel. +49 (0) 345 5582 - 1470
>                                   +49 (0) 345 5582 - 0
> sneumann(at)IPB-Halle.DE     Fax. +49 (0) 345 5582 - 1409
>
>
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