Re: [Psidev-ms-dev] Update "Current and future support for mzML" table

[pierre-alain b. <pie...@is...>]

HI Steffen,
The page is updated, thanks for the info.
Haven't changed the table for now. But would be nice to add a bit more 
info as sou suggest.

Pierre-Alain


On 19.02.2013 16:34, Steffen Neumann wrote:
> Hi,
>
> Now that the psidev.info website has been transitioned,
> I'd propose to add more software to
> http://www.psidev.info/mzML (scroll down to the end)
> and possibly make this table a bit more prominent.
>
> I also suggest to distinguish between end-user software
> and frameworks / toolkits / parsers targeting developers.
>
> >From my side I'd offer the two entries below.
>
> This request comes out of the COSMOS initiative,
> where we try to increase the adoption of mzML
> in the metabolomics area, specifically for GC-MS.
>
> Yours,
> Steffen
>
> -------------------------------------------------------------------
>
> mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data)
> http://bioconductor.org/packages/release/bioc/html/mzR.html
>
> "mzR provides a unified API to the common file formats and parsers
> available for mass spectrometry data. It comes with a wrapper for the
> ISB random access parser for mass spectrometry mzXML, mzData and mzML
> files. The package contains the original code written by the ISB, and a
> subset of the proteowizard library for mzML. The netCDF reading code has
> previously been used in XCMS."
>
> Authors: Bernd Fischer, Steffen Neumann, Laurent Gatto
>
> -------------------------------------------------------------------
>
> pymzML: an interface between Python and mzML Mass spectrometry Files
> https://github.com/pymzml/pymzML
>
> "Python module to interface mzML data in Python based on cElementTree
> with additional tools for MS-informatics."
>
> Authors: T. Bald, J. Barth, A. Niehues, M. Specht, M. Hippler, C. Fufezan
>
> -------------------------------------------------------------------
>
>