[Psidev-ms-dev] Version 3.30.0 of psi-ms.obo released

[Gerhard M. <may...@ru...>]

Dear proteomics community,

the new version 3.30.0 of psi-ms.obo has been released.
It contains the new terms proposed by Matt concerning scoring with the 
MS-GF software.

New CV terms in version 3.30.0 of psi-ms.obo:
=============================================
[Term]
id: MS:1002047
name: MS-GF
def: "MS-GF software used to re-score the peptide-spectrum matches." 
[DOI:10.1021/pr8001244, PMID:18597511]
is_a: MS:1001456 ! analysis software

[Term]
id: MS:1002048
name: MS-GF+
def: "MS-GF+ software used to analyze the spectra." [PSI:PI]
is_a: MS:1001456 ! analysis software

[Term]
id: MS:1002049
name: MS-GF:RawScore
def: "MS-GF raw score." [PSI:PI]
xref: value-type:xsd\:integer "The allowed value-type for this CV term."
is_a: MS:1001143 ! search engine specific score for peptides
is_a: MS:1001153 ! search engine specific score

[Term]
id: MS:1002050
name: MS-GF:DeNovoScore
def: "MS-GF de novo score." [PSI:PI]
xref: value-type:xsd\:integer "The allowed value-type for this CV term."
is_a: MS:1001153 ! search engine specific score

[Term]
id: MS:1002051
name: MS-GF:Energy
def: "MS-GF energy score." [PSI:PI]
xref: value-type:xsd\:nonNegativeInteger "The allowed value-type for 
this CV term."
is_a: MS:1001143 ! search engine specific score for peptides
is_a: MS:1001153 ! search engine specific score

[Term]
id: MS:1002052
name: MS-GF:SpecEValue
def: "MS-GF spectral E-value." [PSI:PI]
xref: value-type:xsd\:double "The allowed value-type for this CV term."
is_a: MS:1001143 ! search engine specific score for peptides
is_a: MS:1001153 ! search engine specific score
is_a: MS:1001872 ! E-value for peptides

[Term]
id: MS:1002053
name: MS-GF:EValue
def: "MS-GF E-value." [PSI:PI]
xref: value-type:xsd\:double "The allowed value-type for this CV term."
is_a: MS:1001143 ! search engine specific score for peptides
is_a: MS:1001153 ! search engine specific score
is_a: MS:1001872 ! E-value for peptides

[Term]
id: MS:1002054
name: MS-GF:QValue
def: "MS-GF Q-value." [PSI:PI]
xref: value-type:xsd\:double "The allowed value-type for this CV term."
is_a: MS:1001143 ! search engine specific score for peptides
is_a: MS:1001153 ! search engine specific score
is_a: MS:1001868 ! q-value for peptides

[Term]
id: MS:1002055
name: MS-GF:PepQValue
def: "MS-GF peptide-level Q-value." [PSI:PI]
xref: value-type:xsd\:double "The allowed value-type for this CV term."
is_a: MS:1001143 ! search engine specific score for peptides
is_a: MS:1001153 ! search engine specific score
is_a: MS:1001868 ! q-value for peptides

[Term]
id: MS:1002056
name: MS-GF:PEP
def: "MS-GF posterior error probability." [PSI:PI]
xref: value-type:xsd\:double "The allowed value-type for this CV term."
is_a: MS:1001143 ! search engine specific score for peptides
is_a: MS:1001153 ! search engine specific score

Best Regards,
Gerhard

-- 
------------
Dipl. Inform. med., Dipl. Wirtsch. Inf. Gerhard Mayer
MPC University of Bochum, ZKF
Universitätsstrasse 150 44801 Bochum
Kairos GmbH
Universitätsstraße 136 44799 Bochum
Email: ger...@ka...
        gma...@ru...