Re: [Psidev-ms-dev] RFC: Collision cell exit potential in CV ?

[Eric D. <ede...@sy...>]

Yes, let's plan on a call this coming Tuesday at the usual time.

Thanks,
Eric


> -----Original Message-----
> From: Steffen Neumann [mailto:sne...@ip...]
> Sent: Wednesday, January 25, 2012 1:01 AM
> To: Mass spectrometry standard development
> Subject: Re: [Psidev-ms-dev] RFC: Collision cell exit potential in CV ?
>
> Hi,
>
> can we add this to the agenda of the next call ?
>
> Yours,
> Steffen
>
> On Wed, 2011-12-21 at 10:21 +0100, Steffen Neumann wrote:
> > Hi,
> >
> > we're generating some examples of TraML files from methods
> > that were developed on a QTrap 3200.
> >
> > One of the parameters is the "CXP, Collision Cell Exit Potential".
> > We couldn't find a corresponding CV term for that.
> >
> > Question: Did we miss anything ? Should one be created ?
> >
> > I have almost no experience with Traps, but I could imagine
> > this should be a child of MS:1000510 (precursor activation
> attribute).
> > Does the following make sense:
> >
> > 	[Term]
> > 	id: MS:1000876
> > 	name: Collision cell exit potential
> > 	def: "Potential difference between Q2 and Q3 in a triple
> quadrupole instrument in volts." [PSI:MS]
> > 	xref: value-type:xsd\:float "The allowed value-type for this CV
> term."
> > 	is_a: MS:1000510 ! precursor activation attribute
> > 	relationship: has_units UO:0000218 ! volt
> > 	synonym: "CXP" EXACT []
> >
> > Is this restricted to triple quads / linear ion traps ?
> > Or is there something equivalent for QqTOF ? Then the def:
> > above should be modified "between Q2 and the following instrument
> compartment..."
> >
> > There is an issue in the tracker for skyline:
> > https://brendanx-
> uw1.gs.washington.edu/labkey/issues/home/issues/details.view?issueId=12
> 2
> >
> > Yours,
> > Steffen
> >
> >
> >
>
> --
> IPB Halle                    AG Massenspektrometrie & Bioinformatik
> Dr. Steffen Neumann          http://www.IPB-Halle.DE
> Weinberg 3                   http://msbi.bic-gh.de
> 06120 Halle                  Tel. +49 (0) 345 5582 - 1470
>                                   +49 (0) 345 5582 - 0
> sneumann(at)IPB-Halle.DE     Fax. +49 (0) 345 5582 - 1409
>
>
>
> -----------------------------------------------------------------------
> -------
> Keep Your Developer Skills Current with LearnDevNow!
> The most comprehensive online learning library for Microsoft developers
> is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3,
> MVC3,
> Metro Style Apps, more. Free future releases when you subscribe now!
> http://p.sf.net/sfu/learndevnow-d2d
> _______________________________________________
> Psidev-ms-dev mailing list
> Psi...@li...
> https://lists.sourceforge.net/lists/listinfo/psidev-ms-dev