Re: [Psidev-ms-dev] Sequence tagging and mzIdent / analysisXML

[Angel P. <an...@ma...>]

Hi David,
Yes, mzIdent has been renamed to analysisXML and its role has been 
expanded to include mroe than just ms search results.
There is an example analysisXML, but it is very likely to change under 
you in the next month or so, as actual development of analysisXML is 
about to get underway as part of a new PSI working group. Would you like 
to join ;) ? Seriously though, if you want input into the process, there 
is the PSI spring meeting in San Fran the end of April (more info on the 
web site).

The example analysisXML (which will change very soon, but you can get 
the gist of what is in it) is here:

http://psidev.sourceforge.net/docstore/download.php?sess=0&parent=19&expand=1&order=name&sortname=ASC&binary=1&id=61

-angel

David L. Tabb wrote:

> Hello, all.  Have there been efforts to discern how results from 
> sequence tagging (rather than database search) should be stored in 
> analysisXML files?
>
> I've seen mention of mzIdent along with analysisXML.  Is it 
> appropriate to think of analysisXML as the successor to mzIdent?  Are 
> there example files of Sequest results translated to this format?
>
> Dave Tabb
>
>
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-- 

Angel Pizarro
Director, Bioinformatics Facility
Institute for Translational Medicine and Therapeutics
University of Pennsylvania
806 BRB II/III
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