Re: [Psidev-ms-dev] mzData issues

[Alexandre M. <ale...@ge...>]

Hi,

You may also have a look to the nearly release web tool
http://insilicospectro.vital-it.ch/cgi/cgiConvertSpectra.pl

regards
Alex

Jimmy Eng wrote:

> Andy,
>
> One nice peak list data conversion tool which is capable of taking
> peak lists in various ASCII formats (Mascot generic format, PKL, DTA,
> etc.) and outputting to mzData is the Peak List Conversion Utility
> available at the Proteome Commons website
>
>    http://www.proteomecommons.org/tools.jsp#File%20Format%20Manipulation
>
> It's an easy to use Java Web Start app that might suit your needs.
>
> - Jimmy

>
>     Andy Jones wrote:
>
>     > Hi,
>     >
>     > I'm trying to convert data from various different instruments into
>     > mzData and I have a few questions.
>     >
>     >    1. One of the instruments produces plain text output for the peak
>     >       list (peak [tab] intensity). Does anyone have a script or some
>     >       code for turning this into the mzData base 64 binary.
>     Otherwise,
>     >       any advice for how best to do this would be welcome.
>     >   
>
>


-- 
Alexandre Masselot, phD
Senior bioinformatician
www.genebio.com
voice: +41 22 702 99 00