Re: [Psidev-ms-dev] mzData conventer status

[Chris T. <chr...@eb...>]

Hi Jian. The particular converters to which you refer are not 
currently being supported, although the original codebase is 
still available, albeit for an older version of the schema. 
Sorry for that. We will soon be in a position where most vendor 
software directly exports mzData you see, hence the failure to 
updating the PSI-generated converters...

The only route for conversion currently is to go via mzXML (they 
have many converters to that format) then through the converter 
developed by Proteome Systems available from the page at 
psidev.sf.net/ms under the heading 'Software supporting mzData'.

I will if you like forward details of a 'wrapped up' version of 
this script that runs without it being necessary to get Java 
correctly configured (this app is in beta at the moment); do let 
me know if that would be useful to you (we are trying to speed 
it up a bit by expoiting some features of Xalan).

Cheers, Chris.

ji...@vb... wrote:
> Hi,
> 
> I've check out the mzData conventer from cvs, I think it was for old
> version of mzData schema, I am wondering how soon it will be updated to
> the most updated version of mzData format?
> 
> Thanks,
> Jian
> 
> 
> 
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  http://psidev.sf.net/
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