Re: [Psidev-ms-dev] [Psidev-ms-vocab] CV terms for MS ontology

[Martin E. <mar...@ru...>]

Hi!

 

I could add them technically, but I'm not familiar with the structure and
previous design logic of the PSI-MS part

of the ontology.

Thus I would be grateful if Luisa could do it...

 

  bye

   Martin

 

 

Von: Salvador Martínez de Bartolomé [mailto:sma...@pr...] 
Gesendet: Donnerstag, 24. Februar 2011 14:47
An: psi...@li...;
psi...@li...; psi...@li...
Betreff: [Psidev-ms-vocab] CV terms for MS ontology

 

Hi all:

Maybe you remember some months ago, I sent to the mailing list a document
with some candidate CV terms for the HUPO-PSI ontologies.

                Matt Chambers sent some comments and Martin Eisenacher also
checked the CV list and added some terms, related to the PI group (CVs for
use in mzIdentML) to the PSI Mass Spectrometry ontology.

                However, Martin asked if Luisa or someone else could check
the rest of CV terms in the list, related with MS group (CVs for use in
mzML), but, as far as I know, nobody answered to that in the mailing list.

                The list with the MS-related CV terms is attached here.

                I hope some people could check them and add them (or not) to
the ontology obo file.

                Best regards,

 

Salvador Martínez de Bartolomé Izquierdo 

Bioinformatics Support - ProteoRed

Lab- B1, National Center for Biotechnology 

C/ Darwin, 3 Universidad Autónoma de Madrid Cantoblanco, 

28049 Madrid Spain

Phone: +34 91 585 4613

Fax: +34 91 585 4506