[Psidev-pi-dev] Issue 42 in psi-pi: Issues with the CV

[<cod...@go...>]

Comment #94 on issue 42 by javizca74: Issues with the CV
http://code.google.com/p/psi-pi/issues/detail?id=42

Some ion types are missing in the CV. We have added to the PRIDE CV, in  
order to
provide fragment ion annotation.

- At the moment there are no -H2O and -NH3 ions for ions c, x and z.
- The same above for precursor ion.
- We have also found that mascot reports the specific type of immonium ion:

immonium A
immonium C
immonium D
immonium E
immonium F
immonium H
immonium I
immonium K
immonium L
immonium M
immonium N
immonium P
immonium Q
immonium R
immonium S
immonium T
immonium V
immonium W
immonium Y


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