[Psidev-pi-dev] Issue 42 in psi-pi: Issues with the CV

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Comment #89 on issue 42 by dcreasy: Issues with the CV
http://code.google.com/p/psi-pi/issues/detail?id=42

Latest Mascot examples give these errors. I think that the mapping needs to  
be changed!

Obsolete CV term: 'MS:1001020 - DB filter taxonomy' at element
'/mzIdentML/AnalysisProtocolCollection/SpectrumIdentificationProtocol/DatabaseFilters/Filter/FilterType'
CV term used in invalid element: 'MS:1001316 - mascot:SigThreshold' at  
element
'/mzIdentML/AnalysisProtocolCollection/ProteinDetectionProtocol/Threshold'
CV term used in invalid element: 'MS:1001316 - mascot:SigThreshold' at  
element
'/mzIdentML/AnalysisProtocolCollection/SpectrumIdentificationProtocol/Threshold'
Violated mapping rule 'ProteinDetectionProtocolThreshold_rule' at element
'/mzIdentML/AnalysisProtocolCollection/ProteinDetectionProtocol/Threshold'  
exactly
one of the allowed terms must be used!
Violated mapping rule 'SpectrumIdentificationProtocolThreshold_rule' at  
element
'/mzIdentML/AnalysisProtocolCollection/SpectrumIdentificationProtocol/Threshold'
exactly one of the allowed terms must be used!


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