[Psidev-ms-dev] PSI-MSS WG Tuesday call reminder

[Eric D. <ede...@sy...>]

Hi everyone, the next PSI Mass Spectrometry Standards Working Group call
will be Tuesday 8am PDT:

 

http://www.timeanddate.com/worldclock/fixedtime.html?day=12
<http://www.timeanddate.com/worldclock/fixedtime.html?day=12&month=5&year=20
09&hour=16&min=0&sec=0&p1=136> &month=5&year=2009&hour=16&min=0&sec=0&p1=136

 

 

08:00 San Francisco

11:00 New York

16:00 London

17:00 Geneva

 

+ Germany: 08001012079

+ Switzerland: 0800000860

+ UK: 08081095644

+ USA: 1-866-314-3683

Generic international: +44 2083222500 (UK number)

 

access code: 297427

 

Agenda:

1) mzML 1.1.0

 

- PAB submitted a nice World HUPO poster abstract

 

- What's the final with empty binary? <binary></binary> or <binary/> or??

 

- David Creasy's problem MSXML4.0 DOM Parser dta_example.mzML:460,3:

  The keyref 'Bioworks' does not resolve to a key...

- David Creasy's problem: <xs:selector xpath=".//dx:spectrum |
.//dx:chromatogram ...

- Confirm that David Creasy is happy with the example file validity before
full release

 

- Marc's two suggested "fraction" terms

- "mzML - MS:1000033 - deisotoping" saga

- Luisa has some other items. See email 2009-05-05 10:46pm PDT

 

- Update documentation for profile & peak list representation

 

- What is the official mzML 1.1 review timescale?

 

Apparent mzML Timeline:

- mzML 1.1.0 resubmitted 2009-03-27

- Announcement of beginning of 30 day public comment period: 2009-04-17

 

Only feedback we have is:

- What can be done about imzML?

- mzML 1.1.0 SRM encoding can inflate RAW->mzML 700x. Allow just
chromatograms to fix this!

 

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2) Need to update the mzML implementations catalog

 

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3) imzML alignment

 

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4) MIAPE-MS revision

- Have revised document to discuss at ASMS

 

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5) TraML development