Re: [Psidev-pi-dev] PSI-PI Working group conference call on Wednesday 12th November at 4:00pm UK time

[Pierre-Alain B. <pie...@is...>]

Thanks David.
FYI, for mzML, we had generated a excel mapping spreadsheet (if you want 
to see it...)

The format is ok for me. About the notes: the descriptions of what 
should be the content from a MIAPE point of view are in the MIAPE 
document, in the Annex table.

Note also that for mzML-MIAPE MS mapping, there were a few items not 
covered by MIAPE, and also not covered by mzML. The latest have either 
been annotated for a future version of mzML (similar to the quantitation 
in AnalysisXML), or just left out and annotated as such (for instance 
flow rates, detector sensitivity). Either they are independant or an 
estimation that looks more like an interpretation. We there need to 
decide whether those should be taken out of MIAPE or not.

I have commented two of the notes. If there are unclear items, just put 
a note in and I can clarify

One more: for mzML, we have two (at least) levels of stringency for the 
validators: basic semantic and MIAPE compliance. Therefore we can deal 
with legacy being compliant woth the format, even if it does not comply 
with MIAPE


Cheers
Pierre-Alain

David Creasy wrote:
> I've started on the MIAPE conformance doc:
>
> http://psidev.info/index.php?q=node/386
>
> Can we discuss whether this is a suitable format on the call later.
> (Looks as though we may have a couple of things to add to the schema...)
>
> Thanks,
> David
>
> David Creasy wrote:
>   
>> Hi everyone,
>>
>> There will be an AnalysisXML working group conference call on WEDNESDAY
>> (instead of Thursday) at:
>> http://www.timeanddate.com/worldclock/fixedtime.html?day=12&month=11&year=2008&hour=16&min=0&sec=0&p1=136 
>>
>>
>> Minutes from last meeting at:
>> http://psidev.info/index.php?q=node/384
>>
>>
>> Agenda: (strangely identical to last week, although progress has been 
>> made!)
>> 1. Review of minutes of last meeting
>>
>> 2. Status of mapping document and CV
>>
>> 3. Issue 30: Enzymes
>>    http://code.google.com/p/psi-pi/issues/detail?id=30
>>    Almost complete now?
>>    http://code.google.com/p/psi-pi/issues/detail?id=30&can=1#c37
>>
>> 4. Other items on the issues list:
>>    http://code.google.com/p/psi-pi/issues/list
>>
>> Dial in details:
>>
>> + Germany: 08001012079
>> + Switzerland: 0800000860
>> + UK: 08081095644
>> + USA: 1-866-314-3683
>> + Generic international: +44 2083222500 (UK number)
>>
>> access code: 297427
>>
>>     
>
>