Re: [Psidev-pi-dev] New schema committed

[Jones, A. <And...@li...>]

A few more minor changes I want to make to the schema:

- Remove the rest of the underscores that precede some of the element names in FuGElight (e.g. "_role" --> "role")
- Make AnalysisProtocol and AnalysisProtocolApplication abstract - I think they are supposed to be anyway?
- ProteinDetection has an element called _runtimeParams, I would prefer this to be just "params" (since this is effectively a protocol not a protocol application so these are not strictly runtime parameters)
- AnalysisProtocolCollection allows any subclasses of Protocol to be included so this allows a FuGE GenericProtocol to be reported. I think we should restrict the protocol collection to only reporting subclasses of AnalysisProtocol i.e. SpectrumIdentificationProtocol and ProteinDetectionProtocol

I also plan to strip more out of FuGE light so it only contains classes that we are using now or are likely to want to use in axml v2.

I would like to upload these changes today if possible while I have time to do it, so let me know if anyone seems an obvious problem with any of these changes? We can always role them back if I've missed something

Cheers
Andy




> -----Original Message-----
> From: Jones, Andy [mailto:And...@li...]
> Sent: 26 September 2008 10:44
> To: psi...@li...
> Subject: [Psidev-pi-dev] New schema committed
> 
> Some changes to the schema uploaded by SVN. As discussed on the call, it seems
> to make sense to have the summary collections at the top of the file e.g. cvList,
> AnalysisSoftware etc.
> 
> 
> 
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