Re: [Psidev-ms-dev] Current mapping file

[Marc S. <st...@in...>]

Hi Matt and all others,

thanks for the up-to-date link.
The other version I found is at: 
http://psidev.cvs.sourceforge.net/psidev/psi/psi-ms/mzML/schema/ms-mapping.xml?view=log

I have several questions/comments regarding the mapping file.

Comment 1:
There is no mapping for the "/mzML/run" tag

Comment 2:
There is no mapping for the 
"/mzML/run/spectrumList/spectrum/spectrumDescription/precursorList/precursor/isolationWindow" 
tag

Comment 3:
There is no mapping for the "data processing parameter" terms (MS:1000630)

Question 1:
According to the mapping file the "ms level" term (MS:1000511) should be 
under "spectrumDescription", but is under "spectrum" in the tiny1 example.
Which one is right?

Best,
  Marc


P.S.:
I attached a small XSL script I use to visualize the mapping file.
Perhaps it it useful for others as well.
You simply have to add the absolute path to the XSL script to the 
mapping, then you can visualize the file in a web browser:

<?xml version="1.0" encoding="UTF-8"?>
<?xml-stylesheet type="text/xsl" 
href="file:///C:/Desktop/Projekte/OpenMS/PSI - 
mzML/Mapping/ms-mapping.xsl"?>
...