Re: [Psidev-ms-dev] <scan> nativeID

[Kessner, D. E. <Dar...@cs...>]

Nope, same idea, but we had only talked about putting 'nativeID' in the
<offset> entry in the <index>.

I am proposing including 'nativeID' as an attribute to the corresponding
<spectrum> as well.


Darren



-----Original Message-----
From: psi...@li...
[mailto:psi...@li...] On Behalf Of Joshua
Tasman
Sent: Monday, March 03, 2008 10:28 AM
To: Mass spectrometry standard development
Subject: Re: [Psidev-ms-dev] <scan> nativeID

Hi Darren,

I'm confused about this discussion (though maybe I've lost my place in
the threads?)  Is this different than the ideas we were discussing last
week, regarding string formats for various vendor native scan addressing
schemes?

Josh


Kessner, Darren E. wrote:
> Hi all,
> 
>  
> 
> To pick up the discussion regarding <index> with nativeID, since we
have:
> 
>   <offset id="S19" nativeID="19">1234</offset>
> 
>  
> 
> It would also be convenient, and consistent, to have nativeID in
<scan>:
> 
>   <spectrum index=0 id="S19" nativeID="19">
> 
>   ...
> 
>   </spectrum>
> 
>  
> 
> In general, whatever information is in the <index> entry should be 
> easily available in the actual <spectrum> element.  It makes
generating 
> the <index> a lot simpler for writers, and allows easier validation of

> the <spectrum> for readers.
> 
>  
> 
>  
> 
> Darren
> 
>  
> 
>  
> 
>  
> 
> Darren Kessner
> 
> Scientific Programmer
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> Dar...@cs... <mailto:Dar...@cs...>
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