[Psidev-ms-dev] Latest MSData package

[Kessner, D. E. <Dar...@cs...>]

Hi all,

 

We have a new MSData package available for your perusal.  Basic mzXML
reading/writing has been added -- all the scan handling works, but some
of the meta-data translation has not been implemented.

 

There are a few sample programs using the MSData library, in
pwiz/pwiz/msdata_tools:

 

hello_msdata:  writes an MSData object from memory to mzML and mzXML

hello_ramp:  example of the RAMPAdapter interface

msdiff:  comparison of two files (either file can be mzML or mzXML, '-i'
ignores meta-data and just compares scan data)

msconvert:  general conversion utility (mzML <-> mzXML at the moment)

 

http://www.sfcap.cshs.org/private/pwiz_src_msdata_080204.zip

 

login: psidev

password: pwiz

 

Latest legal update from Parag:

"We have approval to release this under the apache license pending
approval from our risk management division which has to add it to some
list in case someone decides to sue us for using it..."

 

Comments and suggestions, and especially bug reports, are welcome.

 

 

Darren

 

 

 

Darren Kessner

Scientific Programmer

Dar...@cs...

310-423-9538

 

Spielberg Family Center for Applied Proteomics

Cedars-Sinai Medical Center

http://www.sfcap.cshs.org/

 

 

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