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Re: [Psidev-pi-dev] question analysisxml in combination with mascot.
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From: David C. <dc...@ma...> - 2007-07-16 16:41:29
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Dear Robert,<br>
I'm afraid analysisXML has not yet been released - there is still
development work in progress and it's changing frequently. If you
really need an intermediate format, it may be safest to use one of the
other export formats available with export_dat.pl or export_dat_2.pl<br>
<br>
Ah - I just see another message from you that's been held up by sf for
a few days.<br>
I'll answer that one separately...<br>
<br>
Best regards,<br>
David Creasy<br>
<br>
<br>
Kerkhoven, R. wrote:
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<p class="MsoNormal"><font face="Arial" size="2"><span
style="font-size: 10pt; font-family: Arial;"><o:p> </o:p></span></font></p>
<p class="MsoNormal"><font face="Arial" size="2"><span
style="font-size: 10pt; font-family: Arial;">Dear psi-members,<o:p></o:p></span></font></p>
<p class="MsoNormal"><font face="Arial" size="2"><span
style="font-size: 10pt; font-family: Arial;">I’m looking for an
working example of analysisXML (willing
to extend it also).<o:p></o:p></span></font></p>
<p class="MsoNormal"><font face="Arial" size="2"><span
style="font-size: 10pt; font-family: Arial;">Can someone give me a
clue where to look? <o:p></o:p></span></font></p>
<p class="MsoNormal"><font face="Arial" size="2"><span
style="font-size: 10pt; font-family: Arial;">It will be use as an
intermediate format to fill a PRIDE
database with Mascot identifications.<o:p></o:p></span></font></p>
<p class="MsoNormal"><font face="Arial" size="2"><span
style="font-size: 10pt; font-family: Arial;"><o:p> </o:p></span></font></p>
<p class="MsoNormal"><font face="Arial" size="2"><span
style="font-size: 10pt; font-family: Arial;">Yours sincerely,<o:p></o:p></span></font></p>
<p class="MsoNormal"><st1:PersonName w:st="on"><font face="Arial"
size="2"><span style="font-size: 10pt; font-family: Arial;">Robert
Kerkhoven</span></font></st1:PersonName><font face="Arial" size="2"><span
style="font-size: 10pt; font-family: Arial;">.<o:p></o:p></span></font></p>
<p><font face="Times New Roman" size="3"><span
style="font-size: 12pt;">====================================<br>
Drs. R. Kerkhoven<br>
Bioinformatics<br>
Biomolecular Mass Spectrometry / NPC<br>
<a href="http://www.netherlandsproteomicscentre.nl">http://www.netherlandsproteomicscentre.nl</a><br>
<br>
Sorbonnelaan 16<br>
3584 CA, <st1:City w:st="on"><st1:place w:st="on">Utrecht</st1:place></st1:City><br>
The <st1:country-region w:st="on"><st1:place w:st="on">Netherlands</st1:place></st1:country-region><br>
<br>
+31(0)30 2536758 office<br>
<a href="mailto:r.k...@ch...">r.k...@ch...</a><br>
====================================</span><o:p></o:p></font></p>
<p class="MsoNormal"><font face="Times New Roman" size="3"><span
style="font-size: 12pt;"><o:p> </o:p></span></font></p>
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<pre class="moz-signature" cols="72">--
David Creasy
Matrix Science
64 Baker Street
London W1U 7GB, UK
Tel: +44 (0)20 7486 1050
Fax: +44 (0)20 7224 1344
<a class="moz-txt-link-abbreviated" href="mailto:dc...@ma...">dc...@ma...</a>
<a class="moz-txt-link-freetext" href="http://www.matrixscience.com">http://www.matrixscience.com</a>
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