#1 MIF_compact typo

[Anonymous]

I've tried to use the MIF_compact.xml stylesheet that you can
download and, I believe, has a typo in line 85. I reads:

<xsl:template match="interactionList//ProteinInteractor" >

and it should be:

<xsl:template match="interactionList//proteinInteractor" >

being proteinInteractor spelled with lower 'p'.

Also, the stylesheet does not work with xsltproc. In order to use it, I
had to change line 17:

xmlns="net:sf:psidev:mi"

for:

xmlns:mif="net:sf:psidev:mi"

and replace every xpath node with the respective name space "mif"
like this:

<xsl:template match="mif:availabilityList" >

[Nobody/Anonymous]

Logged In: NO

[Comment by aquinn - can't log in to SourceForge for some
reason]:

This relates to MIF 1.0. I added a 'psi:' namespace prefix
in MIF 2.5 - see
[http://cvs.sourceforge.net/viewcvs.py/psidev/psi/mi/rel25/tools/MIF25_compact.xsl?rev=1.2&view=auto].
The "typo" has been present for nearly 3 years
[http://cvs.sourceforge.net/viewcvs.py/psidev/psi/mi/xml/src/MIF_compact.xsl?rev=1.1&view=markup]
- fortunately XSLT is not case sensitive!

I can't check out from CVS at the moment (yet another
problem on the SourceForge CVS server) so I will try to fix
by 5 May 2006.

[Antony Quinn]

Logged In: YES
user_id=1069984

Fixing typo did not cause a problem. However, adding the
namespace prefix highlighted a problem that has always
existed but is only apparent when using an explicit
namespace: the experimentList template adds
experimentDescription nodes to *all* experimentList
elements, even those under
interactionList/interaction/experimentList that should be
experimentRef. I don't know why using a namespace prefix
should cause this, so I am leaving the file as it is for now.

[Antony Quinn]

Logged In: YES
user_id=1069984

See previous comment.

Using an explicit path match might solve the problem, that
is change:

xsl:template match="psi:experimentList"

to:

xsl:template match="psi:entry/psi:experimentList"