#127 possible malformed term?

[Valerie Wood]

while searching I found

ID MOD:01437
Ontology PSI-MOD
Term name
cyclo[(prolylserin)-O-yl] cysteinate (Cys-Pro-Ser cross-link)
Matching synonym MOD_RES Cyclo[(prolylserin)-O-yl] cysteinate
Definition
A protein modification that effectively converts an L-cysteine residue, an L-proline residue, and an L-serine residue to cyclo[(prolylserin)-O-yl] cysteinate." [PubMed:7961166, RESID:AA0489 "resulting
Comment
Cross-link 3.

(it seems that the def and comment are incomplete?

val

[Darren Natale]

Can you tell me where you searched to find this? We don't use this term in PRO, and it looks fine in my copy of PSI-MOD.

[Valerie Wood]

It is in our Canto tool. I'll ask Kim to take a look, maybe it is truncated for some reason.

[Valerie Wood]

Is this the wrong tracker for PSI-MOD issues?

[Darren Natale]

It is indeed the wrong tracker. This is the tracker for PRO. I tried anyway. ;)

[Valerie Wood]

oh gosh. Do you know who maintins PSI-MOD? I don't think I actually requested a PSI-MOD term before. I thought you did both!

[Darren Natale]

Nope, just import the ones we need. The OBO Foundry website lists Henning Hermjakob (mailto:hhe@ebi.ac.uk) as the contact, but I'm pretty sure that's very old information and that it is John Garavelli (jsgarave@udel.edu) that maintains it. I followed a few links and found this tracker: https://sourceforge.net/p/psidev/mod-controlled-vocab-changes/new/

[Valerie Wood]

thanks!