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Christopher Edlund
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[4050dc]
Merge branch 'develop'
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Christopher Edlund
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[4594d6]
Updated version text to v0.1.4
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Christopher Edlund
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[1c9cbd]
Re-added expected results for regression tests
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Christopher Edlund
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[549e34]
Changed LF line endings from .txt files to .res...
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Christopher Edlund
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[acca88]
Added .gitattributes file to properly deal with...
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Christopher Edlund
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[4b0e4c]
Temporarily removed expected results files
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Christopher Edlund
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[2b2180]
Fixed bug that calculated SNP call rate incorre...
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Christopher Edlund
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[277487]
Merging release-0.1.3 branch into master
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Christopher Edlund
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[265da7]
Merge remote-tracking branch 'remotes/origin/ma...
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Christopher Edlund
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[f2cbbb]
Updated text
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Christopher Edlund
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[37f219]
Updated error string
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Christopher Edlund
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[1c8e0f]
Reformatted text
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Christopher Edlund
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[714eb8]
Renamed README to have markdown extension inste...
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Christopher Edlund
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[45ba8c]
Added documentation to README.txt
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Christopher Edlund
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[cb4373]
Updated Maven settings for JAR naming
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Christopher Edlund
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[a15502]
Added License
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Christopher Edlund
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[481847]
Configured for Maven and m2Eclipse
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Christopher Edlund
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[08bfeb]
Added Readme
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Christopher Edlund
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[05422b]
Refactored CommandLineOptions and all users of ...
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Christopher Edlund
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[d42478]
Added regression tests
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Christopher Edlund
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[908200]
Added empty constructor so options can be initi...
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Christopher Edlund
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[fcb11b]
Added functional tests and test data for SnpWor...
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Christopher Edlund
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[4103f5]
Updated unit test since keep member variable is...
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Christopher Edlund
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[debe58]
Added unit test for ScoreSorter class
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Christopher Edlund
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[4174d3]
Removed global command line options singleton v...
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Christopher Edlund
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[d30687]
- Refactored logic previously happening in this...
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Christopher Edlund
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[cd3cbe]
Added --seed option for randomly selecting indi...
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Christopher Edlund
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[a4f20b]
Refactored keep/remove sample logic
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Christopher Edlund
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[6f6fde]
- Refactored logic previously happening in Prun...
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Christopher Edlund
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[6899b7]
- Refactored logic for removing and keeping a l...
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Christopher Edlund
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[febdbf]
Created new class for writing LD results to a f...
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Christopher Edlund
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[8f2027]
Created new class for writing pruning results t...
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Christopher Edlund
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[20baab]
Set default value of 'keep' member variable to ...
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Christopher Edlund
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[912b09]
Added directory structure for unit tests, inclu...
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Christopher Edlund
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[1c290f]
Updated gitignore for changing from Ant to Maven
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Christopher Edlund
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[ee5da2]
Added configuration for Maven
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Christopher Edlund
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[2f73cb]
Moved files using a Maven folder structure
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Christopher Edlund
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[911a65]
Merge branch 'release-0.1.2'
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Christopher Edlund
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[7bab9c]
Merge branch 'release-0.1.2' into develop
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Christopher Edlund
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[f31d61]
Updated version to 0.1.2
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Christopher Edlund
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[d9ff61]
Fixed minor bug where number of SNPs filtered b...
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Updated website to http://prioritypruner.source...
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Final changes before initial release version 0.1.0
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Added log4j.appender.Stdout.threshold=info to l...
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Updated code
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Removed docs
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Up-to-date version of PriorityPruner