From: SourceForge.net <no...@so...> - 2012-12-03 15:51:26
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Curation tool item #3549162, was opened at 2012-07-26 07:07 Message generated for change (Comment added) made by val_wood You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2525791&aid=3549162&group_id=65526 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: None Status: Open Resolution: None Priority: 3 Private: No Submitted By: Valerie Wood (val_wood) Assigned to: Nobody/Anonymous (nobody) >Summary: internal error 109/ various Initial Comment: This was definately caused by having the session open in 2 windows happened when selecting phenotype term curs/45dd89cc4951b51a/annotation/edit/12/phenotype#c=FYPO%3A0001214&s=sensitito+potas Gene: spt7 Questions? Contact curators ... Internal error DBIx::Class::ResultSet::delete(): DBI Exception: DBD::SQLite::st execute failed: database is locked [for Statement "DELETE FROM cursprop WHERE ( ( ( curs = ? AND type = ? ) AND curs = ? ) )"] at lib/PomCur/Track/StatusStorage.pm line 109 There has been an internal error. The problem has been logged and will be investigated. ---------------------------------------------------------------------- >Comment By: Valerie Wood (val_wood) Date: 2012-12-03 07:51 Message: Same error here: transferred from https://sourceforge.net/tracker/index.php?func=detail&aid=3564994&group_id=65526&atid=2525791 I tried to edit a phenotype annotation to add a condition, and it all seemed to go fine until I hit 'add', and got this: Internal error DBIx::Class::ResultSet::delete(): DBI Exception: DBD::SQLite::st execute failed: database is locked [for Statement "DELETE FROM cursprop WHERE ( ( ( curs = ? AND type = ? ) AND curs = ? ) )"] at lib/PomCur/Track/StatusStorage.pm line 109 Error There has been an internal error. The problem has been logged and will be investigated. It's http://curation.pombase.org/pombe/curs/982304b134332abd/annotation/process_alleles/18 ---------------------------------------------------------------------- Comment By: Valerie Wood (val_wood) Date: 2012-12-03 07:41 Message: transferring from https://sourceforge.net/tracker/?func=detail&aid=3561245&group_id=65526&atid=2525791 I have never seen this before I was adding the MF GO:0016887 to curs e73b6293989d19a9 and got: Internal error DBIx::Class::ResultSet::delete(): DBI Exception: DBD::SQLite::st execute failed: database is locked [for Statement "DELETE FROM cursprop WHERE ( ( ( curs = ? AND type = ? ) AND curs = ? ) )"] at lib/PomCur/Track/StatusStorage.pm line 109 ---------------------------------------------------------------------- Comment By: Kim Rutherford (kim_rutherford) Date: 2012-11-26 18:07 Message: I still don't know how this could happen except when the ontology update runs at stupid o'clock. I'll keep thinking. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2525791&aid=3549162&group_id=65526 |