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pombase-controlled-vocab — PomBase controlled vocabularies
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From: SourceForge.net <no...@so...> - 2011-07-08 13:30:42
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Controlled vocabulary item #3358450, was opened at 2011-07-08 13:30 Message generated for change (Tracker Item Submitted) made by val_wood You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2096378&aid=3358450&group_id=65526 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: None Status: Open Resolution: None Priority: 5 Private: No Submitted By: Valerie Wood (val_wood) Assigned to: Nobody/Anonymous (nobody) Summary: BIOGRID qualifier data Initial Comment: Low priority Dropbox/pombase/chado_load/interactions/ see if we can do anything useful with qualifier and phenotype data ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2096378&aid=3358450&group_id=65526 |
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From: SourceForge.net <no...@so...> - 2011-06-20 09:22:44
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Controlled vocabulary item #2655376, was opened at 2009-03-02 20:16 Message generated for change (Comment added) made by val_wood You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2096378&aid=2655376&group_id=65526 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: None Status: Open Resolution: None Priority: 1 Private: No Submitted By: Valerie Wood (val_wood) Assigned to: Nobody/Anonymous (nobody) Summary: fungal development ontology Initial Comment: follow up ---------------------------------------------------------------------- >Comment By: Valerie Wood (val_wood) Date: 2011-06-20 09:22 Message: I don't know if anybody maintains this or if it is in the OBo foundary but we might need it for phenotype work? ---------------------------------------------------------------------- Comment By: Valerie Wood (val_wood) Date: 2009-03-02 20:17 Message: see sporulation rearrangement e-mail ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2096378&aid=2655376&group_id=65526 |
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From: SourceForge.net <no...@so...> - 2011-06-20 08:50:41
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Controlled vocabulary item #2943706, was opened at 2010-02-01 11:18 Message generated for change (Settings changed) made by val_wood You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2096378&aid=2943706&group_id=65526 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: None Status: Open Resolution: None Priority: 1 Private: No Submitted By: Valerie Wood (val_wood) Assigned to: Nobody/Anonymous (nobody) Summary: phosphorylation sites, add residues Initial Comment: PMID: 18257517 allow to map a bunch of phosphorylation sites onto specific residues ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2096378&aid=2943706&group_id=65526 |
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From: SourceForge.net <no...@so...> - 2011-05-25 19:54:02
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Controlled vocabulary item #3307705, was opened at 2011-05-25 19:54 Message generated for change (Tracker Item Submitted) made by val_wood You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2096378&aid=3307705&group_id=65526 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: None Status: Open Resolution: None Priority: 5 Private: No Submitted By: Valerie Wood (val_wood) Assigned to: Nobody/Anonymous (nobody) Summary: O-linked/N-linked modification Initial Comment: I removed these qualifiers from the modification controlled curation because these really need to be captured by additional specificity using MOD ontology...most other annotation probably also need to be more granular and probably need to also look at evidence. N-linked aah2 aah4 inv1 aah3 SPCC757.12 O-linked SPAPB2C8.01 fta5 SPAC977.07 wsc1 map4 SPBC1348.08 SPBC359.04 ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2096378&aid=3307705&group_id=65526 |
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From: SourceForge.net <no...@so...> - 2011-04-04 21:31:46
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Controlled vocabulary item #3274874, was opened at 2011-04-04 21:31 Message generated for change (Tracker Item Submitted) made by val_wood You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2096378&aid=3274874&group_id=65526 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: None Status: Open Resolution: None Priority: 5 Private: No Submitted By: Valerie Wood (val_wood) Assigned to: Nobody/Anonymous (nobody) Summary: gene expression Initial Comment: 1. gene expression, split expression regulated by into =ve -ve (some already have qualifers) 2. Go through and work out what is needed ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=2096378&aid=3274874&group_id=65526 |