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#428 subsets: taxon restrictions and restricting subsets of ontologies from visibility in the curation tool

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nobody
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3
2013-09-09
2013-01-08
Valerie Wood
No

We should be able to have a way of configuring which parts of the ontologies are presented in the curation tool. Examples might be excluding prokaryotic specific terms when annotating pombe.

We also would like to be able to restrict the tool to sub-sets of an ontology. For example that we want to be able to curate genes with protein features from the sequence ontology (and ignore the rest of SO).

See: https://sourceforge.net/tracker/?func=detail&atid=2525791&aid=3465391&group_id=65526

We are going to request the required manipulations from Owl tools

Related

Chado: #185
Curation tool: #430
Curation tool: #431

Discussion

  • Valerie Wood

    Valerie Wood - 2013-06-28

    my mistake

    it would be "abnormal protein localization I think"
    (or maybe it should be a 'grouping term' protein localization phenotype, which does not exist right now.... will discuss with Midori, but for starters "abnormal protein localization will work"
    I am not sure what relationships are under here.

    val

     

  • Valerie Wood

    Valerie Wood - 2013-09-09
    • summary: taxon restrictions and restricting subsets of ontologies from visibility in the curation tool --> subsets: taxon restrictions and restricting subsets of ontologies from visibility in the curation tool
    • Group: -->
    • Priority: 1 --> 3
     

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