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Home modified by Ernest Diez Benavente

Ernest Diez Benavente — Wed, 18 Mar 2015 16:59:44 -0000

--- v4
+++ v5
@@ -1,7 +1,7 @@
 PhyloTrack
-PhyloTrack is a JavaScript-based library for the interactive study of variation in clonal microorganisms, where the genomes of several isolates after been sequenced and their data analysed will be incorporated into an application with high user interactive functionality. The tools for the transformation of the data are basically written in Perl and Python. In the application is worth highlighting the Phylogeny tree, the Map view, the Genome Browser and the tool for the Positioning of Samples in the tree.
+PhyloTrack is a JavaScript-based library for the interactive study of variation in clonal microorganisms, where the genomes of several isolates after been sequenced and their data analysed will be incorporated into an application with high user interactive functionality. The tools for the transformation of the data are written in Perl and Python. The resulting application consists of a Phylogenetic tree, a Map view, a Genome Browser and a processing tool for the Positioning of Samples in the phylogenetic tree.

-To illustrate the usefullnes of the software we considered 1,601
+
To illustrate the usefulness of the software we considered 1,601
 whole-genome sequences of Mycobacterium tuberculosis complex
 isolates (the etiological agent of tuberculosis) from different areas
 of the world and with representation of all seven major lineages

Home modified by Ernest Diez Benavente

Ernest Diez Benavente — Mon, 29 Sep 2014 18:06:23 -0000

--- v3
+++ v4
@@ -5,10 +5,9 @@
 whole-genome sequences of Mycobacterium tuberculosis complex
 isolates (the etiological agent of tuberculosis) from different areas
 of the world and with representation of all seven major lineages
-and sub-lineages in which 91k SNPs have been identified (See screenshots)
+and sub-lineages in which 91k SNPs have been identified (See screenshots) (http://pathogenseq.lshtm.ac.uk/phytblive/index.php).

 The wiki contains 2 main pages the [PhyTB help][1] for the tool deployed and the [Phylotrack library help][2] referring to the library used to transform the data into the appropriate format.

    [1]: https://sourceforge.net/p/phylotrack/wiki/PhyTB%20Help/
    [2]: https://sourceforge.net/p/phylotrack/wiki/PhyloTrack%20Help/
-

Home modified by Ernest Diez Benavente

Ernest Diez Benavente — Mon, 29 Sep 2014 17:59:31 -0000

--- v2
+++ v3
@@ -1,5 +1,5 @@
 PhyloTrack
-PhyloTrack is a JavaScript-based library for the interactive study of variation in clonal microorganisms, where several isolates genomes after been sequenced and their data analysed the application will process the data and create the data needed for the creation an application with high user interactive functionality. Highlighting the creation of a Phylogeny tree, a Map view, a Genome Browser and a tool for the Positioning of Samples in the tree.
+PhyloTrack is a JavaScript-based library for the interactive study of variation in clonal microorganisms, where the genomes of several isolates after been sequenced and their data analysed will be incorporated into an application with high user interactive functionality. The tools for the transformation of the data are basically written in Perl and Python. In the application is worth highlighting the Phylogeny tree, the Map view, the Genome Browser and the tool for the Positioning of Samples in the tree.

 To illustrate the usefullnes of the software we considered 1,601
 whole-genome sequences of Mycobacterium tuberculosis complex

Home modified by Ernest Diez Benavente

Ernest Diez Benavente — Mon, 29 Sep 2014 17:39:47 -0000

--- v1
+++ v2
@@ -1,8 +1,14 @@
-Welcome to your wiki!
+PhyloTrack
+PhyloTrack is a JavaScript-based library for the interactive study of variation in clonal microorganisms, where several isolates genomes after been sequenced and their data analysed the application will process the data and create the data needed for the creation an application with high user interactive functionality. Highlighting the creation of a Phylogeny tree, a Map view, a Genome Browser and a tool for the Positioning of Samples in the tree.

-This is the default page, edit it as you see fit. To add a new page simply reference it within brackets, e.g.: [SamplePage].
+To illustrate the usefullnes of the software we considered 1,601
+whole-genome sequences of Mycobacterium tuberculosis complex
+isolates (the etiological agent of tuberculosis) from different areas
+of the world and with representation of all seven major lineages
+and sub-lineages in which 91k SNPs have been identified (See screenshots)

-The wiki uses [Markdown](/p/phylotrack/wiki/markdown_syntax/) syntax.
+The wiki contains 2 main pages the [PhyTB help][1] for the tool deployed and the [Phylotrack library help][2] referring to the library used to transform the data into the appropriate format.

-[[members limit=20]]
-[[download_button]]
+   [1]: https://sourceforge.net/p/phylotrack/wiki/PhyTB%20Help/
+   [2]: https://sourceforge.net/p/phylotrack/wiki/PhyloTrack%20Help/
+

Discussion for Home page

Ernest Diez Benavente — Mon, 29 Sep 2014 17:28:51 -0000

PhyloTrack

PhyloTrack is a JavaScript-based library for the interactive study of variation in clonal microorganisms, where several isolates genomes after been sequenced and their data analysed the application will process the data and create the data needed for the creation an application with high user interactive functionality. Highlighting the creation of a Phylogeny tree, a Map view, a Genome Browser and a tool for the Positioning of Samples in the tree.

Home modified by Ernest Diez Benavente

Ernest Diez Benavente — Mon, 22 Sep 2014 08:11:54 -0000

Welcome to your wiki!

This is the default page, edit it as you see fit. To add a new page simply reference it within brackets, e.g.: [SamplePage].

The wiki uses Markdown syntax.

Project Members:

Ernest Diez Benavente (admin)