phibase2 Web application changes

add Exception handlers: 404 error and missing entity

Jacek Grzebyta — Fri, 27 Sep 2013 11:14:14 -0000

add Exception handlers: 404 error and missing entity
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- add more cancel buttons

Jacek Grzebyta — Thu, 26 Sep 2013 12:59:08 -0000

add more cancel buttons - changed all messages from message.properties
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- change pom file and configuration of compiler plugin version

Jacek Grzebyta — Thu, 26 Sep 2013 12:59:08 -0000

change pom file and configuration of compiler plugin version - give more config examples into phibase.properties - add more log commands in ExperimentalEntitiesUtils - add persist interaction to InteractionUtils - in the interaction flow the interaction/experimental system and CVgeneric entities are identified by their primary key not UUID - add next button to interaction block - move all context files to the WEB-INF directory
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- fixed problem with services controller

Jacek Grzebyta — Thu, 26 Sep 2013 12:59:08 -0000

fixed problem with services controller
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Merge the main developing branch

Jacek Grzebyta — Thu, 26 Sep 2013 12:59:08 -0000

Merge the main developing branch
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- add "No evidence" to experimental evidence

Jacek Grzebyta — Thu, 26 Sep 2013 12:59:08 -0000

add "No evidence" to experimental evidence - removes question marks around "Phytopath" word in the foot page - add ROLE_USER to the hierarchy with the lowest permissions
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- fixed problem with JUnit test error

Jacek Grzebyta — Thu, 26 Sep 2013 12:59:08 -0000

fixed problem with JUnit test error - fixed misspell in conversionServices.xml name
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- add phibase version in the page foot

Jacek Grzebyta — Thu, 26 Sep 2013 12:59:08 -0000

add phibase version in the page foot - add default PhibaseVersion instance - add converter xsd:date >> java.util.Date - changed EBI to EMBL gene/protein database source - fixed problem with top menu style
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- add customised ObjectMapper

Jacek Grzebyta — Wed, 04 Sep 2013 17:12:00 -0000

add customised ObjectMapper - add filter to Gene controller to filter out model for json response - add authors head tag - replace menu dvi-style to proper html5 nav - replace div block to header tag - add separate footer jsp
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- create curation record in the beginning of the curation process

Jacek Grzebyta — Wed, 04 Sep 2013 17:12:00 -0000

create curation record in the beginning of the curation process - make the root flow without persistence context. Thanks that the persistence will be executed in different places without separate 'persistenceFlow'. Also it gives some isolation - clean the structure of flows. NOT FINISHED. - add final cancel page - partially implement restore curation record from database based on record's UUID
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