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Commit [r41]  Maximize  Restore  History

Paul's mixed bag of changes including:

* Column filtering
* Load/Save in .pfaam of Seq Annot,ResAnnot,ColumnFilter
* Fix for Column Selection after hiding columns
* PRint selected nodes bug
* Visible Clusters vs Clusters for Verticle Bar
* default block size change
* control + arrow key for shifting seq

pauldana 2004-07-09

Browse code at this revision

Parent: [r40]

Child: [r42]

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changed /trunk/pfaat/src/com/neogenesis/pfaat/AboutDialog.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/Alignment.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentAnnPanel.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentFrame.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentGroupPanel.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentNamePanel.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentPageLayout.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentPanel.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/ColumnAnnotationComponent.java
added /trunk/pfaat/src/com/neogenesis/pfaat/ColumnFilter.java
added /trunk/pfaat/src/com/neogenesis/pfaat/ColumnFilterComponent.java
added /trunk/pfaat/src/com/neogenesis/pfaat/ColumnFilterDialog.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/ConsensusComponent.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/DisplayProperties.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/RulerAnnotationComponent.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/RulerComponent.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/Sequence.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/SequenceAnnComponent.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/SequenceComponent.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/SequenceGroupComponent.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/SequenceNameComponent.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/io/PfamLoader.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/print/PrintGrid.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/print/PrintPSDialog.java
changed /trunk/pfaat/src/forester/atv/ATVVerticleBar.java
/trunk/pfaat/src/com/neogenesis/pfaat/AboutDialog.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/Alignment.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentAnnPanel.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentFrame.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentGroupPanel.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentNamePanel.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentPageLayout.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentPanel.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/ColumnAnnotationComponent.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/ColumnFilter.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/ColumnFilterComponent.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/ColumnFilterDialog.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/ConsensusComponent.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/DisplayProperties.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/RulerAnnotationComponent.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/RulerComponent.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/Sequence.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/SequenceAnnComponent.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/SequenceComponent.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/SequenceGroupComponent.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/SequenceNameComponent.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/io/PfamLoader.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/print/PrintGrid.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/print/PrintPSDialog.java Diff Switch to side-by-side view
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/trunk/pfaat/src/forester/atv/ATVVerticleBar.java Diff Switch to side-by-side view
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