Protein Family Alignment Annotation Tool svncode

Brought to you by: carlsonjf, dcaffrey, eshuang, simonxi

Commit [r1966] Maximize Restore History

1) Includes a failed attempt to properly handle taxonomyid and it varios spellling forms when adding markers. This needs to be revisitied. 2) Added / specified argument types for various Iterators, JComboBoxes etc to address warnings

Authored by: dcaffrey 2023-08-01

Browse code at this revision

Parent: [r1965]

Child: [r1967]

changed	/trunk/pfaat/src/org/pfaat/core/tree/Node.java
changed	/trunk/pfaat/src/org/pfaat/core/tree/Tree.java
changed	/trunk/pfaat/src/org/pfaat/core/tree/TreeSequenceAnnotationList.java
changed	/trunk/pfaat/src/org/pfaat/gui/common/SequenceAnnotListBase.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/find/action/ATVSearchPanel.java
changed	/trunk/pfaat/src/org/pfaat/gui/tree/component/ATVgraphic.java
changed	/trunk/pfaat/src/org/pfaat/gui/tree/component/ATVnodePanel.java
changed	/trunk/pfaat/src/org/pfaat/gui/tree/component/Marker.java
changed	/trunk/pfaat/src/org/pfaat/gui/tree/edit/action/ATVAddMarkerDialog.java
changed	/trunk/pfaat/src/org/pfaat/gui/tree/edit/action/ATVDeleteMarkerDialog.java
changed	/trunk/pfaat/src/org/pfaat/gui/tree/edit/action/ATVMarkerOptions.java

/trunk/pfaat/src/org/pfaat/core/tree/Node.java Diff Switch to side-by-side view

Protein Family Alignment Annotation Tool svncode

Commit [r1966] Maximize Restore History

/trunk/pfaat/src/org/pfaat/core/tree/Node.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/tree/Tree.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/tree/TreeSequenceAnnotationList.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/SequenceAnnotListBase.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/find/action/ATVSearchPanel.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/tree/component/ATVgraphic.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/tree/component/ATVnodePanel.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/tree/component/Marker.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/tree/edit/action/ATVAddMarkerDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/tree/edit/action/ATVDeleteMarkerDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/tree/edit/action/ATVMarkerOptions.java Diff Switch to side-by-side view