Protein Family Alignment Annotation Tool svncode

Brought to you by: carlsonjf, dcaffrey, eshuang, simonxi

Commit [r1950] Maximize Restore History

move various classes from src/com/neogenesis/util/ src/org/pfaat/gui/common

Authored by: dcaffrey 2023-07-27

Parent: [r1949]

Child: [r1951]

1 2 > >> (Page 1 of 2)

changed	/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PluginManager.java
removed	/trunk/pfaat/src/com/neogenesis/util/ColorIcon.java
removed	/trunk/pfaat/src/com/neogenesis/util/FontSizeCache.java
removed	/trunk/pfaat/src/com/neogenesis/util/JListX.java
removed	/trunk/pfaat/src/com/neogenesis/util/JarClassLoader.java
removed	/trunk/pfaat/src/com/neogenesis/util/JarResources.java
removed	/trunk/pfaat/src/com/neogenesis/util/LinkLabel.java
removed	/trunk/pfaat/src/com/neogenesis/util/MultiClassLoader.java
removed	/trunk/pfaat/src/com/neogenesis/util/Quotes.java
changed	/trunk/pfaat/src/org/pfaat/commandline/msa/RenameSequences.java
changed	/trunk/pfaat/src/org/pfaat/commandline/tree/ParseTreebest.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/Alignment.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/Sequence.java
changed	/trunk/pfaat/src/org/pfaat/core/tree/Node.java
added	/trunk/pfaat/src/org/pfaat/gui/common/ColorIcon.java
added	/trunk/pfaat/src/org/pfaat/gui/common/JListX.java
added	/trunk/pfaat/src/org/pfaat/gui/common/JarClassLoader.java
added	/trunk/pfaat/src/org/pfaat/gui/common/JarResources.java
added	/trunk/pfaat/src/org/pfaat/gui/common/LinkLabel.java
added	/trunk/pfaat/src/org/pfaat/gui/common/MultiClassLoader.java
added	/trunk/pfaat/src/org/pfaat/gui/common/Quotes.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/AlignmentFrame.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ComputeChangeInSolventAccessibilityDialog.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ComputeSolventAccessibilityDialog.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScoresOptionsChooser.java