Protein Family Alignment Annotation Tool svncode

Brought to you by: carlsonjf, dcaffrey, eshuang, simonxi

Commit [r1947] Maximize Restore History

Move various classes from src/com/neogenesis/pfaat/util to src/org/pfaat/gui/common/

Authored by: dcaffrey 2023-07-27

Browse code at this revision

Parent: [r1946]

Child: [r1948]

<< < 1 2 3 4 > >> (Page 2 of 4)

added	/trunk/pfaat/src/org/pfaat/gui/common/FileUtil.java
added	/trunk/pfaat/src/org/pfaat/gui/common/FussyStringTokenizer.java
added	/trunk/pfaat/src/org/pfaat/gui/common/IterationListener.java
added	/trunk/pfaat/src/org/pfaat/gui/common/MultiSearchOptionsBase.java
added	/trunk/pfaat/src/org/pfaat/gui/common/MultiSearchOptionsParser.java
changed	/trunk/pfaat/src/org/pfaat/gui/common/PathManager.java
changed	/trunk/pfaat/src/org/pfaat/gui/common/ProgressWorker.java
added	/trunk/pfaat/src/org/pfaat/gui/common/SearchOptionsBase.java
added	/trunk/pfaat/src/org/pfaat/gui/common/SequenceAnnotListBase.java
added	/trunk/pfaat/src/org/pfaat/gui/common/SymmetricEigenvalueDecomposition.java
added	/trunk/pfaat/src/org/pfaat/gui/common/Utils.java
added	/trunk/pfaat/src/org/pfaat/gui/common/dialogs/GetNameValueDialog.java
added	/trunk/pfaat/src/org/pfaat/gui/common/dialogs/MultiSearchDialog.java
added	/trunk/pfaat/src/org/pfaat/gui/common/dialogs/MultiSearchPanel.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/AlignmentFrame.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScores.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScoresFrame.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CorrelateFrame.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ExtractProfileDialog.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/PercentIdentiyMatrixFrame.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/colorscheme/ColorSchemeDialog.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/colorscheme/ColorSchemeManager.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/colorscheme/ResidueColorScheme.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/component/EditAnnotationsDialog.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/component/EditLineAnnDialog.java

/trunk/pfaat/src/org/pfaat/gui/common/FileUtil.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/FussyStringTokenizer.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/IterationListener.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/MultiSearchOptionsBase.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/MultiSearchOptionsParser.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/PathManager.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/ProgressWorker.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/SearchOptionsBase.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/SequenceAnnotListBase.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/SymmetricEigenvalueDecomposition.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/Utils.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/dialogs/GetNameValueDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/dialogs/MultiSearchDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/common/dialogs/MultiSearchPanel.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/AlignmentFrame.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScores.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScoresFrame.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CorrelateFrame.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ExtractProfileDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/PercentIdentiyMatrixFrame.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/colorscheme/ColorSchemeDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/colorscheme/ColorSchemeManager.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/colorscheme/ResidueColorScheme.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/component/EditAnnotationsDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/component/EditLineAnnDialog.java Diff Switch to side-by-side view

<< < 1 2 3 4 > >> (Page 2 of 4)