Protein Family Alignment Annotation Tool svncode

changed	/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbFrame.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbSelectionModeManager.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbStructureModeManager.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/ConsolePane.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/DocumentOutputStream.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/DocumentWriter.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/DoubleSlider.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/FixedWidthTextField.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/GroupManager.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/IntSlider.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/LazyBoundedRangeModel.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/PopupWideComboBox.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/ScrollGrid.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/ScrollableGridLayout.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/ScrollableViewport.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/swingx/SwingWorker.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/util/GetNameValueDialog.java
removed	/trunk/pfaat/src/com/neogenesis/pfaat/util/ProgressWorker.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/AlignmentSaverWorker.java
added	/trunk/pfaat/src/org/pfaat/gui/common/ConsolePane.java
added	/trunk/pfaat/src/org/pfaat/gui/common/DocumentOutputStream.java
added	/trunk/pfaat/src/org/pfaat/gui/common/DocumentWriter.java
added	/trunk/pfaat/src/org/pfaat/gui/common/FixedWidthTextField.java
added	/trunk/pfaat/src/org/pfaat/gui/common/GroupManager.java
added	/trunk/pfaat/src/org/pfaat/gui/common/ProgressWorker.java