Protein Family Alignment Annotation Tool svncode

Brought to you by: carlsonjf, dcaffrey, eshuang, simonxi

Commit [r1777] Maximize Restore History

1) Now calculates more accurate relative accessibilies for modified residues. 2) Prints warning whenever the max possible residue accessibility is exceeded or not set for a modified residue.

Authored by: dcaffrey 2023-06-13

Browse code at this revision

Parent: [r1776]

Child: [r1778]

changed	/trunk/pfaat/pfaatProperties/pfaat.properties
changed	/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/CalculateDeltaRsas.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/CalculateRsas.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/ComputeSolventAccessibilityToStAction.java
added	/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbAminoAcidCodeAndProperties.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbResidue.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbUtil.java

Protein Family Alignment Annotation Tool svncode

Commit [r1777] Maximize Restore History

/trunk/pfaat/pfaatProperties/pfaat.properties Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/CalculateDeltaRsas.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/CalculateRsas.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/ComputeSolventAccessibilityToStAction.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbAminoAcidCodeAndProperties.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbResidue.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbUtil.java Diff Switch to side-by-side view