Protein Family Alignment Annotation Tool svncode

Brought to you by: carlsonjf, dcaffrey, eshuang, simonxi

Commit [r1767] Maximize Restore History

rename annotation annotationSettingsName and getAnnotation() to getAnnotationSettingsName() to reflect their actual function since version 2

Authored by: dcaffrey 2023-06-07

Browse code at this revision

Parent: [r1766]

Child: [r1768]

changed	/trunk/pfaat/src/com/neogenesis/pfaat/Alignment.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/ConsensusSequence.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/EditAnnotationsDialog.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/EditResAnnDialog.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/CalculateDeltaRsas.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/CalculateRsas.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/ComputeChangeInSolventAccessibilityAction.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/ComputeSolventAccessibilityToStAction.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/analysis/plsr/LabelFileGenerator.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/edit/annotations/copy/ResidueAnnotationsCopier.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/io/PfaatLoader.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/io/PfamLoader.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/sequence/residueAnnotation/ResidueAnnotationSearchOptions.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/srs/ImportUniprotAnnotationsDialog.java

/trunk/pfaat/src/com/neogenesis/pfaat/Alignment.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/ConsensusSequence.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/EditAnnotationsDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/EditResAnnDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/CalculateDeltaRsas.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/CalculateRsas.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/ComputeChangeInSolventAccessibilityAction.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ComputeSolventAccessibility/ComputeSolventAccessibilityToStAction.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/analysis/plsr/LabelFileGenerator.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/edit/annotations/copy/ResidueAnnotationsCopier.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/io/PfaatLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/io/PfamLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/sequence/residueAnnotation/ResidueAnnotationSearchOptions.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/srs/ImportUniprotAnnotationsDialog.java Diff Switch to side-by-side view