Protein Family Alignment Annotation Tool svncode

moving old script to windows dir

this will need to be tweak by linux user

initial

webstart no longer needed

initial commit

This version was initally developed as buildWithJpackageAndSignApplication.xml . It includes deploymacosx2022 which is for the ARM architecture and deployPC-64Bit which handles new location of jars in lib/unsigned

1. Changes in 1WWW_V_hits.pfaat to generate webpage/ngfMsa.png. 2. Changes in 1WWW_V_MB.nhx to generate webpage/ngfTree.png . 3. Addition of 1WWW_conservationScoresWithBindSiteResAsStick0.6AndTrkaAsTrace.state to create webpage/ngfStruct.png

This is the 2007 wiki docs. Some of it can be incorporated into the new web page

Slicker webpage images for those that judge a book by its cover

replace with ngfMsa.png