Protein Family Alignment Annotation Tool svncode

Brought to you by: carlsonjf, dcaffrey, eshuang, simonxi

Commit [r1180] Maximize Restore History

Adding JMol 11.8.21 source to pfaat project.

Authored by: nicklinsky 2010-04-04

Browse code at this revision

Parent: [r1179]

Child: [r1181]

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added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/MinBond.java
added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/Minimizer.java
added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/Util.java
added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield
added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/Calculation.java
added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/Calculations.java
added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/CalculationsUFF.java
added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/FFParam.java
added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/ForceField.java
added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/ForceFieldUFF.java
added	/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/UFF.txt
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/Atom.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/AtomCollection.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/AtomIndexIterator.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/AtomIteratorWithinModel.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/AtomIteratorWithinSet.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/Bond.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/BondCollection.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/BondIterator.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/BondIteratorSelected.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/BoxInfo.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/Chain.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/Group.java
added	/trunk/JMOL_11_8_21/src/org/jmol/modelset/HBond.java

/trunk/JMOL_11_8_21/src/org/jmol/minimize/MinBond.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/minimize/Minimizer.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/minimize/Util.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield

Directory.

/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/Calculation.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/Calculations.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/CalculationsUFF.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/FFParam.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/ForceField.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/ForceFieldUFF.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/minimize/forcefield/UFF.txt Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset

Directory.

/trunk/JMOL_11_8_21/src/org/jmol/modelset/Atom.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/AtomCollection.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/AtomIndexIterator.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/AtomIteratorWithinModel.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/AtomIteratorWithinSet.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/Bond.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/BondCollection.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/BondIterator.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/BondIteratorSelected.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/BoxInfo.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/Chain.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/Group.java Diff Switch to side-by-side view

/trunk/JMOL_11_8_21/src/org/jmol/modelset/HBond.java Diff Switch to side-by-side view

<< < 1 .. 17 18 19 20 21 .. 38 > >> (Page 19 of 38)