Command Line

Run the app from the command line.
Pass arguments in through the command line to process inputs and save as MSP or txt files.
The file extension of the output filename is the file type that will be produced.

Command line switches:
/? Display command line switches. All other switches are ignored.

/n Normalise Intensity to this value. Integer. Optional - if omitted then the app's value is used.
e.g. /n 1000

/p Percentage Intensity Cut Off value. 0 to 100. Supports decimal places e.g. 2.53 (should you want to). Optional - if omitted then the app's value is used.
e.g. /p 2.53

/h Header Line. Text enclosed in quotes. This is copied to the output verbatim. Make sure that it complies with the NIST definition if you want an MSP file. Repeat the argument for every line of header. Optional - if omitted then timestamp is used against NAME:
e.g. /h "NAME: some name"
e.g. /h "LINE2: some line2 text"
e.g. /h "LINE3: some line3 text"
will add three lines to the header.

/f Input Filename. Follow the switch with one space and then the full path of the filename in quotes. Repeat the argument for every input file.
e.g. /f "C:\some path\filename_#1.txt"
e.g. /f "D:\some path\filename_#2.txt"
e.g. /f "E:\some path\filename_#3.txt"
will read three files.

/t Output Filename. Follow the switch with one space and then the full path of the filename in quotes. Only the first output filename is used, so don't bother passing in multiple. Optional - if omitted then the output is written to the Clipboard.
e.g. /t "C:\some path\output_filename_#1.msp"
or
e.g. /t "C:\some path\output_filename_#1.txt"

/s The seperator character used between column 1 and column2. Optional - if omitted then a value based on the output file extension is used. If no file extension then tab is used.
e.g. /s @
will use an @ between columns.
If extenstion is .csv - comma, .txt - tab, .msp - tab, .tsv - tab, clipboard - tab