pcsim-users — List for PCSIM users to help each other and share knowledge.

[Pcsim-users] plot

[Mathieu D. <mat...@li...>]

Hi,

I would like to plot the networks created with pcsim (with Gnuplot.py).

I know how to access the neurons (in fact the sub-populations created  
with SpatialSimObjectPopulation) but I don't know how to access the 
synapses in the network.
Furthermore how can I find the source and the destination of a synapse?

Thanks in advance,
Mathieu

Re: [Pcsim-users] PCSIM 0.5.0 on Ubuntu 8.10

[Pecevski D. <de...@ig...>]

Mathieu Dubois wrote:
> P.S.: I plan to install pcsim on a fedora cluster. Are there special issues?
>   
We have fedora core 6 on two clusters. Pcsim compiles and runs well.

best,
Dejan

Re: [Pcsim-users] PCSIM 0.5.0 on Ubuntu 8.10

[Mathieu D. <mat...@li...>]

Hi Christopher, Hi everyone,

I have downloaded the source package and built it (I have a x86_64 machine).

The compilation went fine and all tests were successful.

Thanks everyone for the support.
Mathieu.

P.S.: I plan to install pcsim on a fedora cluster. Are there special issues?

Christopher Nolan wrote:
> Hi Mathieu,
>
>   
>> Would you tell me how did you built mpich2?
>>
>>     
>
> I actually didn't build mpich2 from source, I installed it using the
> .deb package from http://kinetic.dnsalias.org/ubuntu/pool/mpich2/.
>
> Cheers,
> Chris.
>
>   

Re: [Pcsim-users] PCSIM 0.5.0 on Ubuntu 8.10

[Christopher N. <cn...@it...>]

Hi Mathieu,

> 
> Would you tell me how did you built mpich2?
> 

I actually didn't build mpich2 from source, I installed it using the
.deb package from http://kinetic.dnsalias.org/ubuntu/pool/mpich2/.

Cheers,
Chris.

Re: [Pcsim-users] PCSIM 0.050 on Ubuntu 8.10

[Christopher N. <cn...@it...>]

Hi Mathieu,

> The default version of python is 2.5.2. Is it possible to use PCSIM
> with this version?
> 
> In fact I ran into problems with the ElementTree package but I found a
> fix. I later ran into problems with gccxml. So before digging more, I
> would like to know if there are known issues.

I've installed PCSIM on Hardy with the default python version.  I posted
the fix I used for that elementtree package on the forums at
http://sourceforge.net/forum/forum.php?thread_id=2013563&forum_id=537507
.  In Hardy I had to build gccxml from the CVS snapshot myself (as
documented); the Ubuntu package for gccxml-cvs that worked in Gutsy
doesn't appear to work in Hardy.

Cheers,
Chris.

Re: [Pcsim-users] PCSIM 0.050 on Ubuntu 8.10

[Pecevski D. <de...@ig...>]

 >I'm trying to compile PCSIM on Ubuntu 8.10 Hardy Heron.
 >
 >The default version of python is 2.5.2. Is it possible to use PCSIM with
 >this version?
I have installed and used pcsim with Python 2.5 and it ran fine.
The version 2.5.2 in particular is not tested.
 >
 >In fact I ran into problems with the ElementTree package but I found a
 >fix. I later ran into problems with gccxml. So before digging more, I
 >would like to know if there are known issues.
There aren't any known issues for Ubuntu 8.10 with Python 2.5.
I have 7.10 Gutsy on my laptop and had no issues with installation.
There shouldn't be any problems with gccxml. Did you use the latest cvs 
version?
Can you explain the problem that you have?

cheers,
Dejan
 >
 >Thanks in advance,
 >Mathieu

[Pcsim-users] PCSIM 0.050 on Ubuntu 8.10

[Mathieu D. <mat...@li...>]

Hi everyone,

I'm trying to compile PCSIM on Ubuntu 8.10 Hardy Heron.

The default version of python is 2.5.2. Is it possible to use PCSIM with 
this version?

In fact I ran into problems with the ElementTree package but I found a 
fix. I later ran into problems with gccxml. So before digging more, I 
would like to know if there are known issues.

Thanks in advance,
Mathieu