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[Pcsim-users] Error compiling 0.5.4
|
From: Daniel K. <kr...@fi...> - 2009-11-18 10:20:50
|
Hi,
I'm trying to compile pypcsim 0.5.4. I have sticked strictly to the
versions and compile options mentioned in the dependencies.
I get an error when compiling the files generated by the py++. The same
error occurs when I compile from the current svn files.
gcc version: 4.3.3
python version: 2.6
Thanks,
Daniel
>>>> /usr/bin/make -j 2
pypcsim
[ 0%] Built target
generate_python_wrapper_code
[ 56%] Built target
pcsim
[ 56%] [ 56%] Building CXX object
python/CMakeFiles/pypcsim.dir/pypcsim/PredicateBasedConnections.pypp.o
Building CXX object
python/CMakeFiles/pypcsim.dir/pypcsim/HHNeuronTraubMiles91.pypp.o
In file included from
/usr/include/c++/4.3/ext/hash_map:64,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simutils/pcsim_hash.h:21,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simcore/SpikeSender.h:6,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simobjects/ODESystemBasedSpikingNeuron.h:16,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simobjects/HHNeuronTraubMiles91.h:4,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/HHNeuronTraubMiles91.pypp.cpp:4:
/usr/include/c++/4.3/backward/backward_warning.h:33:2: warning: #warning
This file includes at least one deprecated or antiquated header which
may be removed without further notice at a future date. Please use a
non-deprecated interface with equivalent functionality instead. For a
listing of replacement headers and interfaces, consult the file
backward_warning.h. To disable this warning use
-Wno-deprecated.
In file included from
/usr/include/c++/4.3/ext/hash_map:64,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simutils/pcsim_hash.h:21,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/construction/Point3DSet.h:19,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/construction/SpatialSimObjectPopulation.h:15,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/construction/PredicateBasedConnections.h:15,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/PredicateBasedConnections.pypp.cpp:4:
/usr/include/c++/4.3/backward/backward_warning.h:33:2: warning: #warning
This file includes at least one deprecated or antiquated header which
may be removed without further notice at a future date. Please use a
non-deprecated interface with equivalent functionality instead. For a
listing of replacement headers and interfaces, consult the file
backward_warning.h. To disable this warning use
-Wno-deprecated.
In file included from
/home/krieg/software/include/boost-1_34_1/boost/python/class.hpp:29,
from
/home/krieg/software/include/boost-1_34_1/boost/python.hpp:18,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/PredicateBasedConnections.pypp.cpp:3:
/home/krieg/software/include/boost-1_34_1/boost/python/detail/def_helper.hpp:192:
warning: declaration of ‘typename
boost::python::detail::keyword_extract<boost::tuples::tuple<const T1&,
const T2&, const T3&, const T4&, boost::python::default_call_policies,
boost::python::detail::keywords<0ul>, const char*, void
(boost::python::detail::not_specified::*)(), boost::tuples::null_type,
boost::tuples::null_type> >::result_type
boost::python::detail::def_helper<T1, T2, T3, T4>::keywords()
const’
/home/krieg/software/include/boost-1_34_1/boost/python/args_fwd.hpp:35:
warning: changes meaning of ‘keywords’ from ‘struct
boost::python::detail::keywords<0ul>’
In file included from
/home/krieg/software/include/boost-1_34_1/boost/python/class.hpp:29,
from
/home/krieg/software/include/boost-1_34_1/boost/python.hpp:18,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/HHNeuronTraubMiles91.pypp.cpp:3:
/home/krieg/software/include/boost-1_34_1/boost/python/detail/def_helper.hpp:192:
warning: declaration of ‘typename
boost::python::detail::keyword_extract<boost::tuples::tuple<const T1&,
const T2&, const T3&, const T4&, boost::python::default_call_policies,
boost::python::detail::keywords<0ul>, const char*, void
(boost::python::detail::not_specified::*)(), boost::tuples::null_type,
boost::tuples::null_type> >::result_type
boost::python::detail::def_helper<T1, T2, T3, T4>::keywords()
const’
/home/krieg/software/include/boost-1_34_1/boost/python/args_fwd.hpp:35:
warning: changes meaning of ‘keywords’ from ‘struct
boost::python::detail::keywords<0ul>’
In file included from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/gregorian_io.hpp:12,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/conversion.hpp:23,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/gregorian.hpp:21,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/time_formatters.hpp:12,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/posix_time.hpp:24,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simutils/RandomEngine.h:15,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simutils/RandomDistribution.h:18,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/construction/ConnectionIterator.h:14,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/construction/PredicateBasedConnections.h:14,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/PredicateBasedConnections.pypp.cpp:4:
/home/krieg/software/include/boost-1_34_1/boost/date_time/date_facet.hpp:560:
warning: declaration of ‘void
boost::date_time::date_input_facet<date_type, CharT,
InItrT>::special_values_parser(boost::date_time::special_values_parser<date_type,
charT>)’
/home/krieg/software/include/boost-1_34_1/boost/date_time/special_values_parser.hpp:34:
warning: changes meaning of ‘special_values_parser’ from ‘class
boost::date_time::special_values_parser<date_type,
charT>’
In file included from
/home/krieg/software/include/boost-1_34_1/boost/token_iterator.hpp:24,
from
/home/krieg/software/include/boost-1_34_1/boost/tokenizer.hpp:20,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/date_parsing.hpp:14,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/parsers.hpp:13,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/gregorian.hpp:34,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/time_formatters.hpp:12,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/posix_time.hpp:24,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simutils/RandomEngine.h:15,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simutils/RandomDistribution.h:18,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/construction/ConnectionIterator.h:14,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/construction/PredicateBasedConnections.h:14,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/PredicateBasedConnections.pypp.cpp:4:
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp: In
member function ‘bool
boost::offset_separator::operator()(InputIterator&, InputIterator,
Token&)’:
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp:338:
warning: suggest explicit curly brackets to avoid ambiguous
‘else’
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp: In
member function ‘bool boost::char_separator<Char,
Traits>::operator()(InputIterator&, InputIterator,
Token&)’:
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp:451:
warning: suggest explicit curly brackets to avoid ambiguous
‘else’
In file included from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/gregorian_io.hpp:12,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/conversion.hpp:23,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/gregorian.hpp:21,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/time_formatters.hpp:12,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/posix_time.hpp:24,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simutils/RandomEngine.h:15,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simcore/SimObject.h:56,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simobjects/ODESystemBasedSpikingNeuron.h:17,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simobjects/HHNeuronTraubMiles91.h:4,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/HHNeuronTraubMiles91.pypp.cpp:4:
/home/krieg/software/include/boost-1_34_1/boost/date_time/date_facet.hpp:560:
warning: declaration of ‘void
boost::date_time::date_input_facet<date_type, CharT,
InItrT>::special_values_parser(boost::date_time::special_values_parser<date_type,
charT>)’
/home/krieg/software/include/boost-1_34_1/boost/date_time/special_values_parser.hpp:34:
warning: changes meaning of ‘special_values_parser’ from ‘class
boost::date_time::special_values_parser<date_type,
charT>’
In file included from
/home/krieg/software/include/boost-1_34_1/boost/token_iterator.hpp:24,
from
/home/krieg/software/include/boost-1_34_1/boost/tokenizer.hpp:20,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/date_parsing.hpp:14,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/parsers.hpp:13,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/gregorian.hpp:34,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/time_formatters.hpp:12,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/posix_time.hpp:24,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simutils/RandomEngine.h:15,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simcore/SimObject.h:56,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simobjects/ODESystemBasedSpikingNeuron.h:17,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simobjects/HHNeuronTraubMiles91.h:4,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/HHNeuronTraubMiles91.pypp.cpp:4:
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp: In
member function ‘bool
boost::offset_separator::operator()(InputIterator&, InputIterator,
Token&)’:
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp:338:
warning: suggest explicit curly brackets to avoid ambiguous
‘else’
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp: In
member function ‘bool boost::char_separator<Char,
Traits>::operator()(InputIterator&, InputIterator,
Token&)’:
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp:451:
warning: suggest explicit curly brackets to avoid ambiguous
‘else’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/implicit.hpp:
In static member function ‘static void
boost::python::converter::implicit<Source, Target>::construct(PyObject*,
boost::python::converter::rvalue_from_python_stage1_data*) [with Source
= boost::shared_ptr<ConnectionDecisionPredicate>, Target =
PredicateBasedConnections]’:
/home/krieg/software/include/boost-1_34_1/boost/python/implicit.hpp:21:
instantiated from ‘void
boost::python::implicitly_convertible(boost::type<Target>*,
boost::type<Target>*) [with Source =
boost::shared_ptr<ConnectionDecisionPredicate>, Target =
PredicateBasedConnections]’
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/PredicateBasedConnections.pypp.cpp:19:
instantiated from here
/home/krieg/software/include/boost-1_34_1/boost/python/converter/implicit.hpp:34:
warning: unused variable ‘convertible’
[ 56%] Building CXX object
python/CMakeFiles/pypcsim.dir/pypcsim/StaticNMDAAlphaSynapse.pypp.o
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:
At global scope:
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:
In instantiation of ‘boost::detail::is_polymorphic_imp1<SimNetwork>::d1’:
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:56:
instantiated from ‘const bool
boost::detail::is_polymorphic_imp1<SimNetwork>::value’
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:91:
instantiated from ‘const bool
boost::detail::is_polymorphic_imp<SimNetwork>::value’
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:96:
instantiated from ‘boost::is_polymorphic<SimNetwork>’
/home/krieg/software/include/boost-1_34_1/boost/python/to_python_indirect.hpp:55:
instantiated from ‘PyObject* boost::python::to_python_indirect<T,
MakeHolder>::execute(const U&, mpl_::false_) const [with U = SimNetwork,
T = SimNetwork&, MakeHolder =
boost::python::detail::make_reference_holder]’
/home/krieg/software/include/boost-1_34_1/boost/python/to_python_indirect.hpp:37:
instantiated from ‘PyObject* boost::python::to_python_indirect<T,
MakeHolder>::operator()(const U&) const [with U = SimNetwork, T =
SimNetwork&, MakeHolder =
boost::python::detail::make_reference_holder]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/arg_to_python.hpp:224:
instantiated from ‘static PyObject*
boost::python::converter::detail::reference_arg_to_python<T>::get_object(T&)
[with T =
SimNetwork]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/arg_to_python.hpp:229:
instantiated from
‘boost::python::converter::detail::reference_arg_to_python<T>::reference_arg_to_python(T&)
[with T =
SimNetwork]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/arg_to_python.hpp:256:
instantiated from
‘boost::python::converter::arg_to_python<T>::arg_to_python(const T&)
[with T =
boost::reference_wrapper<SimNetwork>]’
/home/krieg/software/include/boost-1_34_1/boost/python/override.hpp:138:
instantiated from ‘boost::python::detail::method_result
boost::python::override::operator()(const A0&, const A1&, const A2&,
const A3&) const [with A0 = boost::python::pointer_wrapper<SimObject*>,
A1 = boost::reference_wrapper<const SimObject::ID>, A2 =
boost::reference_wrapper<const SimObject::ID>, A3 =
boost::reference_wrapper<SimNetwork>]’
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/HHNeuronTraubMiles91.pypp.cpp:219:
instantiated from here
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:28:
error: invalid use of incomplete type ‘struct SimNetwork’
/home/krieg/software/source/pcsim-0.5.4/pcsim/simcore/AdvanceInfo.h:7:
error: forward declaration of ‘struct
SimNetwork’
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:
In instantiation of ‘boost::detail::is_polymorphic_imp1<SimNetwork>::d2’:
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:56:
instantiated from ‘const bool
boost::detail::is_polymorphic_imp1<SimNetwork>::value’
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:91:
instantiated from ‘const bool
boost::detail::is_polymorphic_imp<SimNetwork>::value’
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:96:
instantiated from ‘boost::is_polymorphic<SimNetwork>’
/home/krieg/software/include/boost-1_34_1/boost/python/to_python_indirect.hpp:55:
instantiated from ‘PyObject* boost::python::to_python_indirect<T,
MakeHolder>::execute(const U&, mpl_::false_) const [with U = SimNetwork,
T = SimNetwork&, MakeHolder =
boost::python::detail::make_reference_holder]’
/home/krieg/software/include/boost-1_34_1/boost/python/to_python_indirect.hpp:37:
instantiated from ‘PyObject* boost::python::to_python_indirect<T,
MakeHolder>::operator()(const U&) const [with U = SimNetwork, T =
SimNetwork&, MakeHolder =
boost::python::detail::make_reference_holder]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/arg_to_python.hpp:224:
instantiated from ‘static PyObject*
boost::python::converter::detail::reference_arg_to_python<T>::get_object(T&)
[with T =
SimNetwork]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/arg_to_python.hpp:229:
instantiated from
‘boost::python::converter::detail::reference_arg_to_python<T>::reference_arg_to_python(T&)
[with T =
SimNetwork]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/arg_to_python.hpp:256:
instantiated from
‘boost::python::converter::arg_to_python<T>::arg_to_python(const T&)
[with T =
boost::reference_wrapper<SimNetwork>]’
/home/krieg/software/include/boost-1_34_1/boost/python/override.hpp:138:
instantiated from ‘boost::python::detail::method_result
boost::python::override::operator()(const A0&, const A1&, const A2&,
const A3&) const [with A0 = boost::python::pointer_wrapper<SimObject*>,
A1 = boost::reference_wrapper<const SimObject::ID>, A2 =
boost::reference_wrapper<const SimObject::ID>, A3 =
boost::reference_wrapper<SimNetwork>]’
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/HHNeuronTraubMiles91.pypp.cpp:219:
instantiated from here
/home/krieg/software/include/boost-1_34_1/boost/type_traits/is_polymorphic.hpp:40:
error: invalid use of incomplete type ‘struct SimNetwork’
/home/krieg/software/source/pcsim-0.5.4/pcsim/simcore/AdvanceInfo.h:7:
error: forward declaration of ‘struct
SimNetwork’
/home/krieg/software/include/boost-1_34_1/boost/python/type_id.hpp: In
function ‘boost::python::type_info boost::python::type_id() [with T =
const volatile
SimNetwork&]’:
/home/krieg/software/include/boost-1_34_1/boost/python/converter/registered.hpp:87:
instantiated from ‘const boost::python::converter::registration&
boost::python::converter::detail::registry_lookup2(T& (*)()) [with T =
const volatile
SimNetwork]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/registered.hpp:94:
instantiated from ‘const boost::python::converter::registration&
boost::python::converter::detail::registry_lookup1(boost::type<Target>)
[with T = const volatile
SimNetwork&]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/registered.hpp:105:
instantiated from ‘const boost::python::converter::registration&
boost::python::converter::detail::registered_base<const volatile
SimNetwork&>::converters’
/home/krieg/software/include/boost-1_34_1/boost/python/object/make_ptr_instance.hpp:45:
instantiated from ‘static PyTypeObject*
boost::python::objects::make_ptr_instance<T,
Holder>::get_class_object_impl(const volatile U*) [with U = SimNetwork,
T = SimNetwork, Holder =
boost::python::objects::pointer_holder<SimNetwork*,
SimNetwork>]’
/home/krieg/software/include/boost-1_34_1/boost/python/object/make_ptr_instance.hpp:30:
instantiated from ‘static PyTypeObject*
boost::python::objects::make_ptr_instance<T,
Holder>::get_class_object(const Ptr&) [with Ptr = SimNetwork*, T =
SimNetwork, Holder = boost::python::objects::pointer_holder<SimNetwork*,
SimNetwork>]’
/home/krieg/software/include/boost-1_34_1/boost/python/object/make_instance.hpp:26:
instantiated from ‘static PyObject*
boost::python::objects::make_instance_impl<T, Holder,
Derived>::execute(Arg&) [with Arg = SimNetwork*, T = SimNetwork, Holder
= boost::python::objects::pointer_holder<SimNetwork*, SimNetwork>,
Derived = boost::python::objects::make_ptr_instance<SimNetwork,
boost::python::objects::pointer_holder<SimNetwork*, SimNetwork>
>]’
/home/krieg/software/include/boost-1_34_1/boost/python/to_python_indirect.hpp:96:
instantiated from ‘static PyObject*
boost::python::detail::make_reference_holder::execute(T*) [with T =
SimNetwork]’
/home/krieg/software/include/boost-1_34_1/boost/python/to_python_indirect.hpp:60:
instantiated from ‘PyObject* boost::python::to_python_indirect<T,
MakeHolder>::execute(const U&, mpl_::false_) const [with U = SimNetwork,
T = SimNetwork&, MakeHolder =
boost::python::detail::make_reference_holder]’
/home/krieg/software/include/boost-1_34_1/boost/python/to_python_indirect.hpp:37:
instantiated from ‘PyObject* boost::python::to_python_indirect<T,
MakeHolder>::operator()(const U&) const [with U = SimNetwork, T =
SimNetwork&, MakeHolder =
boost::python::detail::make_reference_holder]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/arg_to_python.hpp:224:
instantiated from ‘static PyObject*
boost::python::converter::detail::reference_arg_to_python<T>::get_object(T&)
[with T =
SimNetwork]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/arg_to_python.hpp:229:
instantiated from
‘boost::python::converter::detail::reference_arg_to_python<T>::reference_arg_to_python(T&)
[with T =
SimNetwork]’
/home/krieg/software/include/boost-1_34_1/boost/python/converter/arg_to_python.hpp:256:
instantiated from
‘boost::python::converter::arg_to_python<T>::arg_to_python(const T&)
[with T =
boost::reference_wrapper<SimNetwork>]’
/home/krieg/software/include/boost-1_34_1/boost/python/override.hpp:138:
instantiated from ‘boost::python::detail::method_result
boost::python::override::operator()(const A0&, const A1&, const A2&,
const A3&) const [with A0 = boost::python::pointer_wrapper<SimObject*>,
A1 = boost::reference_wrapper<const SimObject::ID>, A2 =
boost::reference_wrapper<const SimObject::ID>, A3 =
boost::reference_wrapper<SimNetwork>]’
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/HHNeuronTraubMiles91.pypp.cpp:219:
instantiated from here
/home/krieg/software/include/boost-1_34_1/boost/python/type_id.hpp:88:
error: invalid use of incomplete type ‘struct
SimNetwork’
/home/krieg/software/source/pcsim-0.5.4/pcsim/simcore/AdvanceInfo.h:7:
error: forward declaration of ‘struct
SimNetwork’
/home/krieg/software/include/boost-1_34_1/boost/python/type_id.hpp: In
function ‘boost::python::type_info boost::python::type_id() [with T =
SimNetwork]’:
/home/krieg/software/include/boost-1_34_1/boost/python/object/pointer_holder.hpp:137:
instantiated from ‘void* boost::python::objects::pointer_holder<Pointer,
Value>::holds(boost::python::type_info, bool) [with Pointer =
SimNetwork*, Value =
SimNetwork]’
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/HHNeuronTraubMiles91.pypp.cpp:666:
instantiated from here
/home/krieg/software/include/boost-1_34_1/boost/python/type_id.hpp:88:
error: invalid use of incomplete type ‘struct
SimNetwork’
/home/krieg/software/source/pcsim-0.5.4/pcsim/simcore/AdvanceInfo.h:7:
error: forward declaration of ‘struct
SimNetwork’
/home/krieg/software/include/boost-1_34_1/boost/python/type_id.hpp: In
function ‘boost::python::type_info boost::python::type_id() [with T =
SimNetwork&]’:
/home/krieg/software/include/boost-1_34_1/boost/python/detail/signature.hpp:80:
instantiated from ‘static const
boost::python::detail::signature_element*
boost::python::detail::signature_arity<5u>::impl<Sig>::elements() [with
Sig = boost::mpl::vector6<void, HHNeuronTraubMiles91_wrapper&,
SimObject*, const SimObject::ID&, const SimObject::ID&,
SimNetwork&>]’
/home/krieg/software/include/boost-1_34_1/boost/python/detail/caller.hpp:208:
instantiated from ‘static const
boost::python::detail::signature_element*
boost::python::detail::caller_arity<5u>::impl<F, Policies,
Sig>::signature() [with F = void
(HHNeuronTraubMiles91_wrapper::*)(SimObject*, const SimObject::ID&,
const SimObject::ID&, SimNetwork&), Policies =
boost::python::default_call_policies, Sig = boost::mpl::vector6<void,
HHNeuronTraubMiles91_wrapper&, SimObject*, const SimObject::ID&, const
SimObject::ID&,
SimNetwork&>]’
/home/krieg/software/include/boost-1_34_1/boost/python/object/py_function.hpp:48:
instantiated from ‘const boost::python::detail::signature_element*
boost::python::objects::caller_py_function_impl<Caller>::signature()
const [with Caller = boost::python::detail::caller<void
(HHNeuronTraubMiles91_wrapper::*)(SimObject*, const SimObject::ID&,
const SimObject::ID&, SimNetwork&),
boost::python::default_call_policies, boost::mpl::vector6<void,
HHNeuronTraubMiles91_wrapper&, SimObject*, const SimObject::ID&, const
SimObject::ID&, SimNetwork&>
>]’
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/HHNeuronTraubMiles91.pypp.cpp:666:
instantiated from here
/home/krieg/software/include/boost-1_34_1/boost/python/type_id.hpp:88:
error: invalid use of incomplete type ‘struct
SimNetwork’
/home/krieg/software/source/pcsim-0.5.4/pcsim/simcore/AdvanceInfo.h:7:
error: forward declaration of ‘struct
SimNetwork’
make[3]: ***
[python/CMakeFiles/pypcsim.dir/pypcsim/HHNeuronTraubMiles91.pypp.o]
Error 1
make[3]: *** Waiting for unfinished
jobs....
In file included from
/home/krieg/software/include/boost-1_34_1/boost/python/class.hpp:29,
from
/home/krieg/software/include/boost-1_34_1/boost/python.hpp:18,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/StaticNMDAAlphaSynapse.pypp.cpp:3:
/home/krieg/software/include/boost-1_34_1/boost/python/detail/def_helper.hpp:192:
warning: declaration of ‘typename
boost::python::detail::keyword_extract<boost::tuples::tuple<const T1&,
const T2&, const T3&, const T4&, boost::python::default_call_policies,
boost::python::detail::keywords<0ul>, const char*, void
(boost::python::detail::not_specified::*)(), boost::tuples::null_type,
boost::tuples::null_type> >::result_type
boost::python::detail::def_helper<T1, T2, T3, T4>::keywords()
const’
/home/krieg/software/include/boost-1_34_1/boost/python/args_fwd.hpp:35:
warning: changes meaning of ‘keywords’ from ‘struct
boost::python::detail::keywords<0ul>’
In file included from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/gregorian_io.hpp:12,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/conversion.hpp:23,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/gregorian.hpp:21,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/time_formatters.hpp:12,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/posix_time.hpp:24,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simutils/RandomEngine.h:15,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simcore/SimObject.h:56,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simobjects/GenericDynamicSpikingSynapse.h:4,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simobjects/NMDASynapse.h:8,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/StaticNMDAAlphaSynapse.pypp.cpp:4:
/home/krieg/software/include/boost-1_34_1/boost/date_time/date_facet.hpp:560:
warning: declaration of ‘void
boost::date_time::date_input_facet<date_type,CharT,
InItrT>::special_values_parser(boost::date_time::special_values_parser<date_type,
charT>)’
/home/krieg/software/include/boost-1_34_1/boost/date_time/special_values_parser.hpp:34:
warning: changes meaning of ‘special_values_parser’ from ‘class
boost::date_time::special_values_parser<date_type, charT>’
In file included from
/home/krieg/software/include/boost-1_34_1/boost/token_iterator.hpp:24,
from
/home/krieg/software/include/boost-1_34_1/boost/tokenizer.hpp:20,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/date_parsing.hpp:14,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/parsers.hpp:13,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/gregorian/gregorian.hpp:34,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/time_formatters.hpp:12,
from
/home/krieg/software/include/boost-1_34_1/boost/date_time/posix_time/posix_time.hpp:24,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simutils/RandomEngine.h:15,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simcore/SimObject.h:56,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simobjects/GenericDynamicSpikingSynapse.h:4,
from
/home/krieg/software/source/pcsim-0.5.4/pcsim/simobjects/NMDASynapse.h:8,
from
/home/krieg/software/source/pcsim-0.5.4/python/pypcsim/StaticNMDAAlphaSynapse.pypp.cpp:4:
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp: In
member function ‘bool
boost::offset_separator::operator()(InputIterator&, InputIterator, Token&)’:
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp:338:
warning: suggest explicit curly brackets to avoid ambiguous ‘else’
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp: In
member function ‘bool boost::char_separator<Char,
Traits>::operator()(InputIterator&, InputIterator, Token&)’:
/home/krieg/software/include/boost-1_34_1/boost/token_functions.hpp:451:
warning: suggest explicit curly brackets to avoid ambiguous ‘else’
make[2]: *** [python/CMakeFiles/pypcsim.dir/all] Error 2
make[1]: *** [python/CMakeFiles/pypcsim.dir/rule] Error 2
make: *** [pypcsim] Error 2
BUILD PROCESS FAILED. ERROR = 512
Command: /usr/bin/make -j 2 pypcsim
|
