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Topic	Posts	Views	Last Post
No gaps filled for a 3.5G bp genome with high PacBio coverage? By Zhiliang Chen on Wed Feb 24, 2016 01:03 AM	1	507	By Zhiliang Chen on Wed Feb 24, 2016 01:03 AM
running PBJelly on a cluster with SGE By Hilary on Mon Mar 17, 2014 04:40 PM	3	915	By Zhiliang Chen on Wed Feb 24, 2016 12:28 AM
Assembly step takes a very long time By XIE MIN on Wed Nov 25, 2015 02:51 AM	4	502	By XIE MIN on Tue Dec 01, 2015 09:22 AM
add --maxReads option for the output stage? By XIE MIN on Tue Dec 01, 2015 08:41 AM	1	272	By XIE MIN on Tue Dec 01, 2015 08:41 AM
PBJELLY v15.8.24 - Support step failing By Thiru Ramaraj on Mon Nov 23, 2015 05:15 PM	7	1116	By Thiru Ramaraj on Wed Nov 25, 2015 09:53 PM
Polishing assembly after PBjelly By Shuqing on Wed Nov 18, 2015 03:48 PM	2	444	By Adam English on Tue Nov 24, 2015 05:02 PM
>=2 PacBio reads must support the gap By Biomonika on Fri Mar 06, 2015 09:50 PM	4	607	By Adam English on Fri Nov 06, 2015 09:57 PM
Can I get the unused PacBio reads? By Stinus Lindgreen on Wed Jun 24, 2015 11:42 AM	2	185	By Adam English on Fri Nov 06, 2015 09:55 PM
gap_fill_status.txt reporting multiple inter-scaffold joins for the s... By Lisl Esherick on Thu Aug 06, 2015 08:58 PM	2	452	By Adam English on Fri Nov 06, 2015 09:53 PM
after Honey By Luke Noble on Fri Apr 03, 2015 06:57 PM	2	375	By Adam English on Fri May 29, 2015 05:31 PM
Types of gaps and scaffolds that PBJelly resolves By ambarrio on Tue Sep 16, 2014 02:23 PM	2	1222	By jubs on Thu May 28, 2015 04:09 PM
Reestablishing scaffold orientation in PBJelly output By Luk on Mon Jan 12, 2015 03:37 PM	1	339	By Luk on Mon Jan 12, 2015 03:37 PM
--noRename option of Jelly setup By Matt Conte on Mon Oct 13, 2014 04:46 PM	6	909	By Matt Conte on Fri Oct 17, 2014 03:41 AM
Rule of thumb for small contig filtering By JustinPeyton on Wed Sep 24, 2014 05:22 PM	2	266	By JustinPeyton on Wed Sep 24, 2014 07:39 PM
Is it possible to split reference to lower memory usage? By JustinPeyton on Tue Sep 23, 2014 06:39 PM	1	244	By JustinPeyton on Tue Sep 23, 2014 06:39 PM
Extraction step not working By ambarrio on Tue Sep 09, 2014 04:37 PM	2	486	By ambarrio on Tue Sep 16, 2014 01:33 PM
Unpacking PBSuite_14.9.9.tgz By JeroenF@lumc on Wed Sep 10, 2014 01:37 PM	3	198	By JeroenF@lumc on Wed Sep 10, 2014 05:00 PM
Setup/Mapping not working properly By ambarrio on Wed Aug 27, 2014 09:41 AM	4	524	By ambarrio on Wed Sep 03, 2014 08:09 AM
No gaps to be assembled were found By Takeo Katsuki on Sun Nov 03, 2013 01:48 PM	7	2693	By BIOL on Mon Aug 25, 2014 06:19 PM
CMD when running PBJelly on a cluster By Hilary on Mon Mar 17, 2014 04:53 PM	4	2425	By Adam English on Tue Aug 12, 2014 08:56 PM
About commercial use of PBJelly By satoshi on Thu Jun 05, 2014 01:54 PM	1	205	By satoshi on Thu Jun 05, 2014 01:54 PM
(no subject) By satoshi on Thu Jun 05, 2014 01:53 PM	1	151	By satoshi on Thu Jun 05, 2014 01:53 PM
About commercial use of PBJelly By satoshi on Thu Jun 05, 2014 01:38 PM	1	135	By satoshi on Thu Jun 05, 2014 01:38 PM
--tempDir option for assembly stage not being recognized By Matt Conte on Wed Mar 26, 2014 07:43 PM	2	329	By Matt Conte on Mon Mar 31, 2014 07:53 PM
Jelly.py setup By lfaino on Thu Nov 28, 2013 09:44 AM	5	711	By Won Cheol Yim on Sat Mar 29, 2014 08:24 PM

<< < 1 2 3 > >> (Page 2 of 3)

PBSuite Discussion

Software for Long-Read Sequencing Data from PacBio

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General Discussion

No gaps filled for a 3.5G bp genome with high PacBio coverage?

running PBJelly on a cluster with SGE

Assembly step takes a very long time

add --maxReads option for the output stage?

PBJELLY v15.8.24 - Support step failing

Polishing assembly after PBjelly

>=2 PacBio reads must support the gap

Can I get the unused PacBio reads?

gap_fill_status.txt reporting multiple inter-scaffold joins for the s...

after Honey

Types of gaps and scaffolds that PBJelly resolves

Reestablishing scaffold orientation in PBJelly output

--noRename option of Jelly setup

Rule of thumb for small contig filtering

Is it possible to split reference to lower memory usage?

Extraction step not working

Unpacking PBSuite_14.9.9.tgz

Setup/Mapping not working properly

No gaps to be assembled were found

CMD when running PBJelly on a cluster

About commercial use of PBJelly

(no subject)

About commercial use of PBJelly

--tempDir option for assembly stage not being recognized

Jelly.py setup

PBSuite Discussion

Software for Long-Read Sequencing Data from PacBio

Forums

Help

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General Discussion