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Mohamed Amine CHEBBI, PhD Student
Université de Poitiers
Laboratoire Ecologie et Biologie des Interactions - UMR CNRS 7267
Equipe Ecologie Evolution Symbiose
Bât. B8-B35 - 5 Rue Albert Turpin
TSA 51106
F-86022 Poitiers Cedex 9
FRANCE
Lab website: http://ecoevol.labo.univ-poitiers.fr/
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Can corrected PacBio reads be fed to PBJelly instead of raw reads? Seem like this would work better for gap filling.
Thanks,
KF
Hi Kevin,
Yes you can use corrected Pacbio reads for gap filling with PBJelly.
Best,
Amine
Le 16/11/2016 à 11:05, Mohamed Amine Chebbi a écrit :
--
Mohamed Amine CHEBBI, PhD Student
Université de Poitiers
Laboratoire Ecologie et Biologie des Interactions - UMR CNRS 7267
Equipe Ecologie Evolution Symbiose
Bât. B8-B35 - 5 Rue Albert Turpin
TSA 51106
F-86022 Poitiers Cedex 9
FRANCE
Lab website: http://ecoevol.labo.univ-poitiers.fr/
Hi Kevin,
Yes you can use corrected Pacbio reads for gap filling with PBJelly.
Best,
Amine
De: "Kevin Fengler" kevfengler@users.sf.net
À: "[pb-jelly:discussion]" general@discussion.pb-jelly.p.re.sf.net
Envoyé: Mardi 15 Novembre 2016 21:55:17
Objet: [pb-jelly:discussion] corrected reads
Can corrected PacBio reads be fed to PBJelly instead of raw reads? Seem like this would work better for gap filling.
Thanks,
KF
corrected reads
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Hi Kevin,
Yes you can use corrected Pacbio reads for gap filling with PBJelly.
Best,
Amine