Thank you users for your help in making Jelly better! With your assistance, I was able to better the code to ensure that Jelly's is more accurate and more stable. If you've been using the previous beta-version, I must insist you upgrade to the latest version to ensure you're making the best assemblies possible.
There is still one outstanding issue that has affected many users. I didn't realize that I was developing Jelly with a very old version of networkx (v1.1) in my environment. Unfortunately, the new version handles thing differently enough that Jelly can't work with it right now. I will be addressing this problem as soon as I can. Until then, you need to have networkx v1.1 in your python environment.
As always, please give me any feedback you can and I'll be happy to help you out.
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Have a great day,
~/Adam English