We need to clarify instructions in setup, option 2
PartiGene can screen for vector contamination using the a FASTA file
containing the relevant vector sequences. The location of this file
'vector.seq' is set to '/usr/software/phrap/phrap/vector.seq'.
Do you want to change this entry?
[y/n] :y
Please enter new location for vector.seq (full path)
/usr/local/data/vector.seq
Please enter new location for this entry (full path INCLUDING vector.seq [or whatever your file is called])