Re: [Orchem-devel] News: First Function

[Mark R. <ma...@eb...>]

Hi Federico,
> I finished my first procedure to convert Molfile to SMILES. It works!!
>   
Good stuff !
> I'm using your utility to test and reload the java class into database.
>   
You mean VerifyOrchem.java? Ok.
> I'm trying to follow your indication and your organization. Do you
> prefer that a commit the project frequently or less frequently? 
>
>   
I'd prefer you to commit frequently, so go ahead.

Just to check: whenever you add new Java stored procedures, group them 
logically together in (a) PL/SQL package(s).
Like the existing packages serve a specific purpose for similarity and 
substructure searching.
The same goes for the Java package tree, you may want to add any new 
classes in their own Java package.

By the way - did you get the unit test to work, as described on 
http://orchem.sourceforge.net/developers.html?
Someone else had trouble getting it to work, a java.sql.SQLException: 
"Io exception: Connection reset" when loading the unit test data. Just 
curious if you had seen the same.

Mark.