OperaMS is a metagenomic scaffolding pipeline that takes in a metagenomic scaffold graph and aims to output near-complete individual microbial genomes in your environmental sample.

It uses the following strategy: a graph partitioning tool called Sigma is used to decompose the metagenomic scaffolding problem into distinct single genome scaffolding problems that are then solved by the single genome scaffolder Opera.

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2013-03-11
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