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Opening single slices of a multislice tiff file

iqmmug
2018-06-14
2018-06-15
  • iqmmug

    iqmmug - 2018-06-14

    Hello,
    I am trying to replace JAI with OpenIMAJ as the underlying library for my
    image processing project IQM.
    Is there any way to open single slices out of a an image stack in a single
    tiff file?
    Furthermore, it would be nice if I could read the number of slices out of
    the tiff file header.

    Any help is appreciated,
    Helmut

     
  • Jonathon Hare

    Jonathon Hare - 2018-06-15

    OpenIMAJ probably isn't what you want if you just want to read files - behind the scenes it uses other libraries (including JAI as a fallback) & doesn't really offer much control over how files are read. Something like https://github.com/haraldk/TwelveMonkeys might fit your needs better if you need fine control over reading of files.

     
  • iqmmug

    iqmmug - 2018-06-15

    Many thanks for your answer, I will check this link.
    BTW, IQM is not just about image openeing https://sourceforge.net/projects/iqm/ It has an emphasis on convininet image stack processing and virtual memory handling. Our processing algorithms are implemented as JAI operators, but JAI seems to be outdated and therefore I am looking for alternatives.

     

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