Re: [openbabel-scripting] Re: "did not load properly"

[Noel O'B. <no...@ca...>]

Testing Perl...phew, doesn't work for Perl either. :-)

~/Tools/OpenBabel/openbabel/scripts/perl$ perl Makefile.PL; make; make 

test
Checking if your kit is complete...
Looks good
Writing Makefile for Chemistry::OpenBabel
cp openbabel.pm blib/lib/Chemistry/openbabel.pm
g++ -c  -I../../src -D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS
-DDEBIAN -fno-strict-aliasing -I/usr/local/include -D_LARGEFILE_SOURCE
-D_FILE_OFFSET_BITS=64 -O2   -DVERSION=\"1.0.0\" -DXS_VERSION=\"1.0.0\"
-fPIC "-I/usr/lib/perl/5.8/CORE"   openbabel_perl.cpp
Running Mkbootstrap for Chemistry::OpenBabel ()
chmod 644 OpenBabel.bs
rm -f blib/arch/auto/Chemistry/OpenBabel/OpenBabel.so
LD_RUN_PATH="" g++  -shared -L/usr/local/lib
openbabel_perl.o ../../src/.libs/libopenbabel.a -lz  -o
blib/arch/auto/Chemistry/OpenBabel/OpenBabel.so
chmod 755 blib/arch/auto/Chemistry/OpenBabel/OpenBabel.so
cp OpenBabel.bs blib/arch/auto/Chemistry/OpenBabel/OpenBabel.bs
chmod 644 blib/arch/auto/Chemistry/OpenBabel/OpenBabel.bs
PERL_DL_NONLAZY=1 /usr/bin/perl "-MExtUtils::Command::MM" "-e"
"test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/example....Can't locate Chemistry/OpenBabel.pm in @INC (@INC
contains: /home/no228/Tools/OpenBabel/openbabel/scripts/perl/blib/lib /home/no228/Tools/OpenBabel/openbabel/scripts/perl/blib/arch /etc/perl /usr/local/lib/perl/5.8.4 /usr/local/share/perl/5.8.4 /usr/lib/perl5 /usr/share/perl5 /usr/lib/perl/5.8 /usr/share/perl/5.8 /usr/local/lib/site_perl . /etc/perl /usr/local/lib/perl/5.8.4 /usr/local/share/perl/5.8.4 /usr/lib/perl5 /usr/share/perl5 /usr/lib/perl/5.8 /usr/share/perl/5.8 /usr/local/lib/site_perl .) at t/example.t line 11.
BEGIN failed--compilation aborted at t/example.t line 11.
t/example....dubious
        Test returned status 2 (wstat 512, 0x200)
DIED. FAILED tests 1-11
        Failed 11/11 tests, 0.00% okay
Failed Test Stat Wstat Total Fail  Failed  List of Failed
-------------------------------------------------------------------------------
t/example.t    2   512    11   21 190.91%  1-11
Failed 1/1 test scripts, 0.00% okay. 11/11 subtests failed, 0.00% okay.
make: *** [test_dynamic] Error 2




On Wed, 2005-11-30 at 10:42 -0500, Geoffrey Hutchison wrote:
> On Nov 30, 2005, at 4:51 AM, Noel O'Boyle wrote:
> 
> > On Tue, 2005-11-29 at 17:33 -0500, Geoffrey Hutchison wrote:
> >> On Nov 29, 2005, at 11:07 AM, S Joshua Swamidass wrote:
> >>
> >>> But we still get a problem. Here is the output when you run teh
> >>> exmaple file after changing the name of openbabel.so
> >> ...
> >>> /home/dock/linux/lib/openbabel/APIInterface.so did not load properly
> >>> /home/dock/linux/lib/openbabel/CSRformat.so did not load properly
> >> ...
> >
> > Same here.
> 
> OK, I have one more question... If you try running the tests for the  
> Perl wrapper, do they work?
> 
> "perl Makefile.PL; make; make test"
> 
> I'm trying to sort out if this is a Python-specific problem or not.  
> Haven't found much. :-(
> 
> Thanks,
> -Geoff
> 
> 
> -------------------------------------------------------
> This SF.net email is sponsored by: Splunk Inc. Do you grep through log files
> for problems?  Stop!  Download the new AJAX search engine that makes
> searching your log files as easy as surfing the  web.  DOWNLOAD SPLUNK!
> http://ads.osdn.com/?ad_id=7637&alloc_id=16865&op=click
> _______________________________________________
> OpenBabel-scripting mailing list
> Ope...@li...
> https://lists.sourceforge.net/lists/listinfo/openbabel-scripting