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#895 Big in SMILES to image generation

2.3.x
open
nobody
None
1
2013-11-29
2013-10-02
Jeff Janes
No

Trying to render this three-component smiles leads to a broken image with some atoms zooming off to infinity. If I remove the HCl, it renders properly. If I remove the stereochemistry, it is still broken. It is also broken with png rather than svg

obabel -:'Cl.COc1cccc(c1)[C@@]1(O)CCCC[C@H]1CN(C)C.COc1cccc(c1)[C@@]1(O)CCCC[C@@H]1CN(C)C' -osvg > /tmp/bad_struct.svg

1 Attachments
bad_struct.svg

Discussion

  • Noel O'Boyle

    Noel O'Boyle - 2013-11-16

    Looking into it...

     

  • Noel O'Boyle

    Noel O'Boyle - 2013-11-29

    I've passed this onto Sergei Trepalin. He's not available to sort it out for the next month or so though...