Re: [O3Q] Bug in interface to pymol on Mac

[Paolo T. <pao...@un...>]

Dear Philip,

Thanks for reporting this. I'll try to fix it by the next release, which will include the stdev * coeff feature and a few other things; however, I won't be able to build it until Monday.

Best regards,
Paolo

-- 
==========================================================
Paolo Tosco, Ph.D.
Department of Drug Science and Technology
Via Pietro Giuria, 9 - 10125 Torino (Italy)
Tel: +39 011 670 7680 | Mob: +39 348 5537206
Fax: +39 011 670 7687 | E-mail: pao...@un...
http://open3dqsar.org | http://open3dalign.org
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On 1 Aug 2013, at 21:26, Phillip Cruz <pm...@me...> wrote:

> Regarding the bug reported in the interface to pymol on the Mac, I am seeing the same thing.  The problem appears to be that the pymol interface is expecting to read .mol2 files from the temporary directory within /var/tmp, but what is actually in the temporary directory is .mol files (single molecule MDL files).   Pymol is reporting lots of errors similar to:
> 
> PyMOL>load /var/tmp//O3Q.33565.mol_dir.FGauZv/0001.mol2, 0001, 0, mol2
> ExecutiveLoad-Error: Unable to open file '/var/tmp//O3Q.33565.mol_dir.FGauZv/0001.mol2'.
> 
> Thanks.
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