Re: [Opaltoolkit-users] Opal Dashboard Error

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Hello,

I managed to fix the problem. It was an issue with *.jar inside tomcat's 
lib folder.
Opal 2.6 working with tomcat7. Gonna try to setup a first service 
wrapper and GSI security.

On 02/19/2013 09:32 AM, Guillermo Marco Puche wrote:
> Hello,
>
> I deleted previous opal version, filled in config files 
> opal/etc/opal.properties and build.properties
> Stopped tomcat7 server. Built new opal version with: sudo ant install:
>
> $ sudo ant install
> Buildfile: build.xml
> setenv:
>      [mkdir] Created dir: /opt/web/opal/build
>      [mkdir] Created dir: /opt/web/opal/build/classes
> compile:
> Trying to override old definition of task wsdl2java
> setenv:
> generateStubs:
>      [mkdir] Created dir: /opt/web/opal/build/gen
> [wsdl2java] WSDL2Java /opt/web/opal/wsdl/opal.wsdl
>      [javac] Compiling 31 source files to /opt/web/opal/build/classes
>      [javac] Note: Some input files use unchecked or unsafe operations.
>      [javac] Note: Recompile with -Xlint:unchecked for details.
>      [javac] Compiling 99 source files to /opt/web/opal/build/classes
>      [javac] Note: Some input files use or override a deprecated API.
>      [javac] Note: Recompile with -Xlint:deprecation for details.
>      [javac] Note: Some input files use unchecked or unsafe operations.
>      [javac] Note: Recompile with -Xlint:unchecked for details.
>       [copy] Copying 2 files to /opt/web/opal/build/classes
> jar:
>      [mkdir] Created dir: /opt/web/opal/build/jar
>        [jar] Building jar: /opt/web/opal/build/jar/opal-ws-2.5.jar
> install:
>       [copy] Copying 339 files to /usr/tomcat7/webapps
>       [copy] Copying 1 file to /usr/tomcat7/webapps/opal2/WEB-INF/lib
>       [copy] Copying 13 files to /usr/tomcat7/webapps/opal2/WEB-INF/lib
>       [copy] Copying 1 file to /opt/web/opal/etc
>       [copy] Copying 1 file to /opt/web/opal/etc
>       [move] Moving 1 file to /usr/tomcat7/webapps/opal2/WEB-INF/classes
>       [copy] Copying 1 file to /usr/tomcat7/webapps/opal2/WEB-INF/classes
>       [copy] Copying 13 files to /usr/tomcat7/webapps/opal2/WEB-INF/lib
>       [copy] Copying 11 files to /usr/tomcat7/webapps/opal2/WEB-INF/lib
>       [copy] Copying 9 files to /usr/tomcat7/lib
>       [copy] Copying 1 file to /usr/tomcat7/lib
>       [copy] Copying 1 file to /usr/tomcat7/lib
>       [copy] Copying 1 file to /usr/tomcat7/webapps/opal2/WEB-INF/classes
>       [copy] Copying 1 file to /usr/tomcat7/webapps/opal2/WEB-INF/classes
> BUILD SUCCESSFUL
> Total time: 4 seconds
>
> Started tomat7 server, home page works (172.19.0.12:8080).
> When I try to access http://172.19.0.12:8080/opal2/happyaxis.jsp I get 
> 404 error from tomcat.
> I've no idea what'she problem. Maybe a permission issue?
>
> My tomcat7 install is located on /usr/tomcat7:
>
> $ ls -l /usr/tomcat7/
> total 124
> drwxr-xr-x. 2 tomcat tomcat  4096 Feb 18 11:00 bin
> drwxr-xr-x. 4 tomcat tomcat  4096 Feb 18 05:11 common
> drwxr-xr-x. 3 tomcat tomcat  4096 Feb 18 10:58 conf
> drwxr-xr-x. 2 tomcat tomcat  4096 Feb 19 02:20 lib
> -rw-r--r--. 1 tomcat tomcat 56812 Jan 10 23:55 LICENSE
> drwxr-xr-x. 2 tomcat tomcat  4096 Feb 19 02:21 logs
> -rw-r--r--. 1 tomcat tomcat  1192 Jan 10 23:55 NOTICE
> -rw-r--r--. 1 tomcat tomcat  8826 Jan 10 23:55 RELEASE-NOTES
> -rw-r--r--. 1 tomcat tomcat 16163 Jan 10 23:55 RUNNING.txt
> drwxr-xr-x. 3 tomcat tomcat  4096 Feb 18 05:11 server
> drwxr-xr-x. 2 tomcat tomcat  4096 Feb 18 02:45 temp
> drwxr-xr-x. 8 tomcat tomcat  4096 Feb 18 11:28 webapps
> drwxr-xr-x. 3 tomcat tomcat  4096 Feb 18 02:48 work
>
> webapps dir:
>
> $ ls -l /usr/tomcat7/webapps/opal2/
> total 72
> drwxr-xr-x. 2 tomcat tomcat  4096 Feb 19 02:20 css
> drwxr-xr-x. 2 tomcat tomcat  4096 Feb 19 02:20 dashboard-jsp
> -rw-r--r--. 1 tomcat tomcat  9912 Feb 19 02:20 fingerprint.jsp
> -rw-r--r--. 1 tomcat tomcat 15524 Feb 19 02:20 happyaxis.jsp
> -rw-r--r--. 1 tomcat tomcat  7335 Feb 19 02:20 i18nLib.jsp
> drwxr-xr-x. 4 tomcat tomcat  4096 Feb 19 02:20 images
> -rw-r--r--. 1 tomcat tomcat   582 Feb 19 02:20 index.html
> -rw-r--r--. 1 tomcat tomcat  2282 Feb 19 02:20 index.jsp
> drwxr-xr-x. 2 tomcat tomcat  4096 Feb 19 02:20 opalGUI-jsp
> drwxr-xr-x. 2 tomcat tomcat  4096 Feb 19 02:20 scripts
> drwxr-xr-x. 3 tomcat tomcat  4096 Feb 19 02:20 viewer
> drwxr-xr-x. 5 tomcat tomcat  4096 Feb 19 02:20 WEB-INF
>
> And opal installation is located under /opt/web/opal/:
>
> $ ls -l /opt/web/opal/
> total 80
> drwxr-xr-x. 5 gmarco users  4096 Feb 19 02:20 build
> -rw-r--r--. 1 gmarco users   350 Feb 19 02:18 build.properties
> -rw-r--r--. 1 gmarco users 17873 Feb 19 00:47 build.xml
> -rw-r--r--. 1 gmarco users  8924 Feb 19 00:47 CHANGELOG
> drwxr-xr-x. 2 gmarco users  4096 Feb 19 02:12 configs
> drwxr-xr-x. 3 gmarco users  4096 Feb 19 02:12 docs
> drwxr-xr-x. 2 gmarco users  4096 Feb 19 02:20 etc
> drwxr-xr-x. 3 gmarco users  4096 Feb 19 02:12 lib
> -rw-r--r--. 1 gmarco users  1786 Feb 19 00:47 LICENSE
> -rw-r--r--. 1 gmarco users   511 Feb 19 00:47 README
> drwxr-xr-x. 2 gmarco users  4096 Feb 19 02:12 samples
> drwxr-xr-x. 5 gmarco users  4096 Feb 19 00:47 src
> drwxr-xr-x. 3 gmarco users  4096 Feb 19 00:47 webapps
> drwxr-xr-x. 2 gmarco users  4096 Feb 19 02:12 wsdl
>
> Tomcat7 install guide I've followed is this one: 
> http://www.server-world.info/en/note?os=CentOS_6&p=tomcat7
>
> Thanks.
>
> Best regards,
> Guillermo.
>
>
> On 02/19/2013 01:03 AM, Luca Clementi wrote:
>> On Mon, Feb 18, 2013 at 4:48 AM, Guillermo Marco Puche
>> <gui...@si...>  wrote:
>>> Hello,
>>>
>>> I just installed Opal over my tomcat 7 server.
>>>
>>> My happyaxis.jsp test page is showing the following error:
>> Hey,
>> The current version of opal 2.4 does not support tomcat 7 or tomcat 6,
>> but only tomcat 5.
>> See the doc:http://www.nbcr.net/data/docs/opal/docs/2.X/serverprerequisites.html
>>
>> In the source code we have a new version which works with tomcat 7. I
>> haven't pushed it out as a new release yet though.
>>
>> I sent you a link from which you can download the source code of opal 2.6
>> In case you haven't received here is the link:
>> http://we.tl/7O6ZoGVLEE
>>
>> Could you test it and let me know if you have any problem?
>>
>> Luca
>>
>> PS: Guillermo sorry for the duplicate emails...
>
>
> -- 
> <http://i.imgur.com/1MjpCpe.png> *g.marco*: Informatician at Sistemas 
> Genómicos S.L <#>
> phone: 0034635197460 <callto:0034635197460>
> web: www.sistemasgenomicos.com <http://www.sistemasgenomicos.com>
>
>
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-- 
<http://i.imgur.com/1MjpCpe.png> *g.marco*: Informatician at Sistemas 
Genómicos S.L <#>
phone: 0034635197460 <callto:0034635197460>
web: www.sistemasgenomicos.com <http://www.sistemasgenomicos.com>