[Opaltoolkit-svnnotification] SF.net SVN: opaltoolkit: [169] trunk/opal

[<sri...@us...>]

Revision: 169
          http://opaltoolkit.svn.sourceforge.net/opaltoolkit/?rev=169&view=rev
Author:   srikrish
Date:     2008-03-26 15:05:04 -0700 (Wed, 26 Mar 2008)

Log Message:
-----------
placeholder for opal2 - which will use a plugin job manager model and
hibernate

Added Paths:
-----------
    trunk/opal/opal2-core/
    trunk/opal/opal2-core/CHANGELOG
    trunk/opal/opal2-core/LICENSE
    trunk/opal/opal2-core/README
    trunk/opal/opal2-core/build-admin.xml
    trunk/opal/opal2-core/build.properties
    trunk/opal/opal2-core/build.properties.template
    trunk/opal/opal2-core/build.xml
    trunk/opal/opal2-core/configs/
    trunk/opal/opal2-core/configs/apbsOpal_config.xml
    trunk/opal/opal2-core/configs/babel_config.xml
    trunk/opal/opal2-core/configs/cat.xml
    trunk/opal/opal2-core/configs/clustalw_config.xml
    trunk/opal/opal2-core/configs/date_config.xml
    trunk/opal/opal2-core/configs/mast_config.xml
    trunk/opal/opal2-core/configs/meme_config.xml
    trunk/opal/opal2-core/configs/pdb2pqr_config.xml
    trunk/opal/opal2-core/configs/tomtom_config.xml
    trunk/opal/opal2-core/docbook/
    trunk/opal/opal2-core/docbook/autointerface.sgml
    trunk/opal/opal2-core/docbook/basicinstallation.sgml
    trunk/opal/opal2-core/docbook/database.sgml
    trunk/opal/opal2-core/docbook/etc/
    trunk/opal/opal2-core/docbook/etc/rocks.dsl
    trunk/opal/opal2-core/docbook/images/
    trunk/opal/opal2-core/docbook/images/nbcr_logo.png
    trunk/opal/opal2-core/docbook/index.sgml
    trunk/opal/opal2-core/docbook/overview.sgml
    trunk/opal/opal2-core/docbook/rocks.css
    trunk/opal/opal2-core/docbook/scheduler.sgml
    trunk/opal/opal2-core/docbook/security.sgml
    trunk/opal/opal2-core/etc/
    trunk/opal/opal2-core/etc/classpath.bat
    trunk/opal/opal2-core/etc/classpath.csh
    trunk/opal/opal2-core/etc/classpath.sh
    trunk/opal/opal2-core/etc/cleanup.sh
    trunk/opal/opal2-core/etc/opal.properties
    trunk/opal/opal2-core/etc/opal.properties.template
    trunk/opal/opal2-core/etc/opal.xml
    trunk/opal/opal2-core/etc/opal_db.sh
    trunk/opal/opal2-core/etc/opal_db.sql
    trunk/opal/opal2-core/etc/server.xml
    trunk/opal/opal2-core/lib/
    trunk/opal/opal2-core/lib/VERSIONS
    trunk/opal/opal2-core/lib/activation-1_0_2.jar
    trunk/opal/opal2-core/lib/axis.LICENSE
    trunk/opal/opal2-core/lib/bouncycastle.LICENSE
    trunk/opal/opal2-core/lib/cog-axis.jar
    trunk/opal/opal2-core/lib/cog-jglobus.jar
    trunk/opal/opal2-core/lib/cog-tomcat.jar
    trunk/opal/opal2-core/lib/cog.LICENSE
    trunk/opal/opal2-core/lib/commons-cli-2.0.jar
    trunk/opal/opal2-core/lib/commons.LICENSE
    trunk/opal/opal2-core/lib/cryptix-asn1.jar
    trunk/opal/opal2-core/lib/cryptix.LICENSE
    trunk/opal/opal2-core/lib/cryptix.jar
    trunk/opal/opal2-core/lib/cryptix32.jar
    trunk/opal/opal2-core/lib/drmaa.jar
    trunk/opal/opal2-core/lib/jce-jdk13-125.jar
    trunk/opal/opal2-core/lib/jcommon-1.0.12.jar
    trunk/opal/opal2-core/lib/jfreechart-1.0.8.jar
    trunk/opal/opal2-core/lib/jgss.jar
    trunk/opal/opal2-core/lib/log4j.LICENSE
    trunk/opal/opal2-core/lib/log4j.properties
    trunk/opal/opal2-core/lib/mailapi-1_3_1.jar
    trunk/opal/opal2-core/lib/postgres_jdbc.LICENSE
    trunk/opal/opal2-core/lib/postgresql-8.2-506.jdbc3.jar
    trunk/opal/opal2-core/lib/puretls.LICENSE
    trunk/opal/opal2-core/lib/puretls.jar
    trunk/opal/opal2-core/lib/servlet-api-2_4.jar
    trunk/opal/opal2-core/lib/struts/
    trunk/opal/opal2-core/lib/struts/README.txt
    trunk/opal/opal2-core/lib/struts/antlr-2.7.2.jar
    trunk/opal/opal2-core/lib/struts/commons-beanutils-1.7.0.jar
    trunk/opal/opal2-core/lib/struts/commons-chain-1.1.jar
    trunk/opal/opal2-core/lib/struts/commons-digester-1.8.jar
    trunk/opal/opal2-core/lib/struts/commons-fileupload-1.2.jar
    trunk/opal/opal2-core/lib/struts/commons-io-1.1.jar
    trunk/opal/opal2-core/lib/struts/commons-validator-1.3.1.jar
    trunk/opal/opal2-core/lib/struts/jstl.jar
    trunk/opal/opal2-core/lib/struts/oro-2.0.8.jar
    trunk/opal/opal2-core/lib/struts/standard.jar
    trunk/opal/opal2-core/lib/struts/struts-core-1.3.8.jar
    trunk/opal/opal2-core/lib/struts/struts-extras-1.3.8.jar
    trunk/opal/opal2-core/lib/struts/struts-taglib-1.3.8.jar
    trunk/opal/opal2-core/lib/wsdl4j.LICENSE
    trunk/opal/opal2-core/lib/xercesImpl.jar
    trunk/opal/opal2-core/samples/
    trunk/opal/opal2-core/samples/sample.fa
    trunk/opal/opal2-core/samples/sample.pdb
    trunk/opal/opal2-core/samples/sample.pqr
    trunk/opal/opal2-core/src/
    trunk/opal/opal2-core/src/edu/
    trunk/opal/opal2-core/src/edu/sdsc/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/common/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/common/CAAuthHandler.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/common/GridMapAuthHandler.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/common/TypeDeserializer.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/common/TypeSerializer.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/common/package.html
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/ArgValidator.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/ForkJobManager.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/GenericServiceClient.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/OpalJobManager.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/persistence/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/persistence/DBManager.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/persistence/package.html
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/servlet/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/servlet/OpalInfoServlet.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/servlet/PloterServlet.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/servlet/package.html
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/util/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/util/DateHelper.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/dashboard/util/package.html
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/actions/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/actions/CreateSubmissionFormAction.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/actions/GetJobStatusAction.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/actions/GetServicesListAction.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/actions/LaunchJobAction.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/actions/package.html
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/common/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/common/AppMetadata.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/common/AppMetadataContainer.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/common/ArgFlag.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/common/ArgParam.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/common/Constants.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/common/GetServiceListHelper.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/common/Group.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/common/OPALService.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/common/package.html
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/gui/package.html
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/package.html
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/util/
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/util/Deploy.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/util/Undeploy.java
    trunk/opal/opal2-core/src/edu/sdsc/nbcr/opal/util/package.html
    trunk/opal/opal2-core/webapps/
    trunk/opal/opal2-core/webapps/opal/
    trunk/opal/opal2-core/webapps/opal/SOAPMonitorApplet.java
    trunk/opal/opal2-core/webapps/opal/WEB-INF/
    trunk/opal/opal2-core/webapps/opal/WEB-INF/classes/
    trunk/opal/opal2-core/webapps/opal/WEB-INF/classes/SOAPMonitorApplet$SOAPMonitorData.class
    trunk/opal/opal2-core/webapps/opal/WEB-INF/classes/SOAPMonitorApplet$SOAPMonitorFilter.class
    trunk/opal/opal2-core/webapps/opal/WEB-INF/classes/SOAPMonitorApplet$SOAPMonitorPage.class
    trunk/opal/opal2-core/webapps/opal/WEB-INF/classes/SOAPMonitorApplet$SOAPMonitorTableModel.class
    trunk/opal/opal2-core/webapps/opal/WEB-INF/classes/SOAPMonitorApplet$SOAPMonitorTextArea.class
    trunk/opal/opal2-core/webapps/opal/WEB-INF/classes/SOAPMonitorApplet$ServiceFilterPanel.class
    trunk/opal/opal2-core/webapps/opal/WEB-INF/classes/SOAPMonitorApplet.class
    trunk/opal/opal2-core/webapps/opal/WEB-INF/classes/i18n.properties
    trunk/opal/opal2-core/webapps/opal/WEB-INF/classes/i18n_ja.properties
    trunk/opal/opal2-core/webapps/opal/WEB-INF/lib/
    trunk/opal/opal2-core/webapps/opal/WEB-INF/lib/axis-ant.jar
    trunk/opal/opal2-core/webapps/opal/WEB-INF/lib/axis.jar
    trunk/opal/opal2-core/webapps/opal/WEB-INF/lib/commons-discovery-0.2.jar
    trunk/opal/opal2-core/webapps/opal/WEB-INF/lib/commons-logging-1.0.4.jar
    trunk/opal/opal2-core/webapps/opal/WEB-INF/lib/jaxrpc.jar
    trunk/opal/opal2-core/webapps/opal/WEB-INF/lib/log4j-1.2.8.jar
    trunk/opal/opal2-core/webapps/opal/WEB-INF/lib/saaj.jar
    trunk/opal/opal2-core/webapps/opal/WEB-INF/lib/wsdl4j-1.5.1.jar
    trunk/opal/opal2-core/webapps/opal/WEB-INF/struts-config.xml
    trunk/opal/opal2-core/webapps/opal/WEB-INF/users.lst
    trunk/opal/opal2-core/webapps/opal/WEB-INF/web.xml
    trunk/opal/opal2-core/webapps/opal/css/
    trunk/opal/opal2-core/webapps/opal/css/README.txt
    trunk/opal/opal2-core/webapps/opal/css/style.css
    trunk/opal/opal2-core/webapps/opal/dashboard-jsp/
    trunk/opal/opal2-core/webapps/opal/dashboard-jsp/contactus.jsp
    trunk/opal/opal2-core/webapps/opal/dashboard-jsp/error.jsp
    trunk/opal/opal2-core/webapps/opal/dashboard-jsp/header.jsp
    trunk/opal/opal2-core/webapps/opal/dashboard-jsp/statistics.jsp
    trunk/opal/opal2-core/webapps/opal/dashboard-jsp/statistics_noDB.jsp
    trunk/opal/opal2-core/webapps/opal/dashboard-jsp/summary.jsp
    trunk/opal/opal2-core/webapps/opal/dashboard-jsp/sysinfo.jsp
    trunk/opal/opal2-core/webapps/opal/fingerprint.jsp
    trunk/opal/opal2-core/webapps/opal/happyaxis.jsp
    trunk/opal/opal2-core/webapps/opal/i18nLib.jsp
    trunk/opal/opal2-core/webapps/opal/images/
    trunk/opal/opal2-core/webapps/opal/images/Camera-Logo.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/
    trunk/opal/opal2-core/webapps/opal/images/MainNav/about_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/about_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/contactus_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/contactus_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/docs_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/docs_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/events_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/events_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/forums_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/forums_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/home_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/home_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/metagenomics_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/metagenomics_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/new_image.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/news_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/news_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/research_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/research_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/summary_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/summary_off.psd
    trunk/opal/opal2-core/webapps/opal/images/MainNav/summary_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/sysinfo_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/sysinfo_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/userinfo_off.jpg
    trunk/opal/opal2-core/webapps/opal/images/MainNav/userinfo_on.jpg
    trunk/opal/opal2-core/webapps/opal/images/Main_Nav_Background.jpg
    trunk/opal/opal2-core/webapps/opal/images/SDSC-logo-red.gif
    trunk/opal/opal2-core/webapps/opal/images/TitleBackground.jpg
    trunk/opal/opal2-core/webapps/opal/images/body_back.jpg
    trunk/opal/opal2-core/webapps/opal/images/boxBottom.gif
    trunk/opal/opal2-core/webapps/opal/images/boxBottomLeft.gif
    trunk/opal/opal2-core/webapps/opal/images/boxBottomRight.gif
    trunk/opal/opal2-core/webapps/opal/images/boxLeft.gif
    trunk/opal/opal2-core/webapps/opal/images/boxRight.gif
    trunk/opal/opal2-core/webapps/opal/images/boxTop.gif
    trunk/opal/opal2-core/webapps/opal/images/boxTopLeft.gif
    trunk/opal/opal2-core/webapps/opal/images/boxTopRight.gif
    trunk/opal/opal2-core/webapps/opal/images/calit_logo.jpg
    trunk/opal/opal2-core/webapps/opal/images/external.png
    trunk/opal/opal2-core/webapps/opal/images/headerCapLeft.jpg
    trunk/opal/opal2-core/webapps/opal/images/headerCapRight.jpg
    trunk/opal/opal2-core/webapps/opal/images/lock_icon.gif
    trunk/opal/opal2-core/webapps/opal/images/mail_icon.gif
    trunk/opal/opal2-core/webapps/opal/images/moore-logo.gif
    trunk/opal/opal2-core/webapps/opal/images/mozilla-org.gif
    trunk/opal/opal2-core/webapps/opal/images/navSubBkg.jpg
    trunk/opal/opal2-core/webapps/opal/images/nbcr.jpg
    trunk/opal/opal2-core/webapps/opal/images/nbcr_logo.gif
    trunk/opal/opal2-core/webapps/opal/images/nbcr_logo.png
    trunk/opal/opal2-core/webapps/opal/images/nbcr_logo_trans.gif
    trunk/opal/opal2-core/webapps/opal/images/nbcr_logo_trans_big.gif
    trunk/opal/opal2-core/webapps/opal/images/ncrr_logo.jpg
    trunk/opal/opal2-core/webapps/opal/images/nih-logo.jpg
    trunk/opal/opal2-core/webapps/opal/images/nsf-logo.jpg
    trunk/opal/opal2-core/webapps/opal/images/researchHeaderText.gif
    trunk/opal/opal2-core/webapps/opal/images/sdsc_logo.png
    trunk/opal/opal2-core/webapps/opal/images/ucsd_logo.png
    trunk/opal/opal2-core/webapps/opal/index.html
    trunk/opal/opal2-core/webapps/opal/index.jsp
    trunk/opal/opal2-core/webapps/opal/js/
    trunk/opal/opal2-core/webapps/opal/js/scripts.js
    trunk/opal/opal2-core/webapps/opal/opalGUI-jsp/
    trunk/opal/opal2-core/webapps/opal/opalGUI-jsp/DisplayForm.jsp
    trunk/opal/opal2-core/webapps/opal/opalGUI-jsp/DisplayServicesList.jsp
    trunk/opal/opal2-core/webapps/opal/opalGUI-jsp/DisplaySimpleForm.jsp
    trunk/opal/opal2-core/webapps/opal/opalGUI-jsp/Error.jsp
    trunk/opal/opal2-core/webapps/opal/opalGUI-jsp/JobStatus.jsp
    trunk/opal/opal2-core/webapps/opal/opalGUI-jsp/Welcome.jsp
    trunk/opal/opal2-core/webapps/opal/opalGUI-jsp/footer.jsp
    trunk/opal/opal2-core/webapps/opal/opalGUI-jsp/header.jsp
    trunk/opal/opal2-core/webapps/opal/opalGUI-jsp/index.jsp
    trunk/opal/opal2-core/webapps/opal/scripts/
    trunk/opal/opal2-core/webapps/opal/scripts/README.txt
    trunk/opal/opal2-core/webapps/opal/scripts/dom-min.js
    trunk/opal/opal2-core/webapps/opal/scripts/yahoo-min.js
    trunk/opal/opal2-core/wsdd/
    trunk/opal/opal2-core/wsdd/opal_deploy.wsdd
    trunk/opal/opal2-core/wsdd/opal_undeploy.wsdd
    trunk/opal/opal2-core/wsdl/
    trunk/opal/opal2-core/wsdl/opal.wsdl


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